coreheat

0.3.2

Correlation Heatmaps

0packages depend

1.2Kdownloads / year

–test coverage

12/13checks pass

Overview

About

Maintained by Vidal FeyFirst published 2021-09-192 releasesCRAN page ↗

Create correlation heatmaps from a numeric matrix. Ensembl Gene ID row names can be converted to Gene Symbols using, e.g., BioMart. Optionally, data can be clustered and filtered by correlation, tree cutting and/or number of missing values. Genes of interest can be highlighted in the plot and correlation significance be indicated by asterisks encoding corresponding P-Values. Plot dimensions and label measures are adjusted automatically by default. The plot features rely on the heatmap.n2() function in the 'heatmapFlex' package.

Install

R (CRAN)Ubuntu (r2u)

install.packages("coreheat", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-coreheat

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

1ERROR12OK

Failing flavors

ERROR r-oldrel-macos-arm64

Slowest check: 10.1 min · r-release-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

ERROR2026-03-10
10 OK · 2 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 40%

Downloads

1.2K

CRAN downloads in the past year

Rank #17,073 · ~3/day · ~102/mo

Releases R versions

Daily download trend is not available in this view yet.

25730 days

64890 days

1.2K1 year

Compare downloads with other packages →

Also on61 r2u

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Depends (1)

Biobase

Imports (7)

WGCNA heatmapFlex convertidmethodsgraphicsgrDevicesrappdirs

LinkingTo (0)

none

Suggests (5)

rmarkdown knitr BiocManager org.Hs.eg.db org.Mm.eg.db

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Vidal Fey

Author, Maintainer

Authors (2)

Vidal Fey

Author, Maintainer

Henri Sara

Author

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.3.2Latest
2026-02-09 · current release · diff ↗
unarchivedReturned to CRAN
2026-02-09
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
archivedRemoved from CRAN
2021-12-13
check problems were not corrected in time
0.2.2
2021-09-19
R
R 4.1.0 released · 2021-05-18

Package metadata

First published: 2021-09-19
Total releases: 2 / 5 yrs
License: GPL-3 OSI
Download size: 3.2 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Report a problem with this page →