commecometrics

1.1.1

Ecometric Models of Trait–Environment Relationships at the Community Level

0packages depend

2.4Kdownloads / year

84.4%test coverage

12/13checks pass

Overview

About

Maintained by Maria A. Hurtado-MateronFirst published 2025-07-223 releasesCRAN page ↗GitHub ↗

Provides a framework for modeling relationships between functional traits and both quantitative and qualitative environmental variables at the community level. It includes tools for trait binning, likelihood-based environmental estimation, model evaluation, fossil projection into modern ecometric space, and result visualization. For more details see Vermillion et al. (2018) doi:10.1007/978-3-319-94265-0_17, Polly et al. (2011) doi:10.1098/rspb.2010.2233 and Polly and Head (2015) doi:10.1017/S1089332600002953.

Install

R (CRAN)pak (dev)Ubuntu (r2u)openSUSE (OBS)

install.packages("commecometrics", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("mariahm1995/commecometrics")

Development version from mariahm1995/commecometrics. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-commecometrics

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-commecometrics

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 4.4 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 0.21

84.4%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-05-12
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
WARNING2026-05-11
12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 140 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 9%
Documented parameters: 98%
Return-value docs: 100%
References docs: 0%

Downloads

2.4K

CRAN downloads in the past year

Rank #18,106 · ~7/day · ~202/mo

Releases R versions

Daily download trend is not available in this view yet.

16130 days

59590 days

2.4K1 year

Compare downloads with other packages →

Also on132 r2u6 autocran

Repository

GitHub ↗ mariahm1995/commecometrics

2Stars

2Forks

1Open issues

0Open PRs

0Releases

47Commits

2Contributors

47 commits · Last activity 2026-07-09 · 0% stars, 30d

Stars over time

2025-10-20 · 12026-07-07 · 2

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/mariahm1995/commecometrics on 2026-08-03.

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5

Imports (9)

ggplot2 leaflet dplyr purrr raster rnaturalearth sf tibble viridis

LinkingTo (0)

none

Suggests (3)

knitr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (5)

Maintainer (1)

Maria A. Hurtado-Materon

Maintainer, Author

Authors (5)

Maria A. Hurtado-Materon

Maintainer, Author

A. Michelle Lawing

Jenny L. McGuire

Author · added in 1.1.1

Rachel A. Short

Author · added in 1.1.1

Leila Siciliano-Martina

Author

A. Michelle Lawing

Package Timeline

3 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.1.1Latest
2026-02-10 · current release · diff ↗
1.0.1
2025-10-07 · diff ↗
1.0.0
2025-07-22
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-07-22
Total releases: 3 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5
Bundled data: 1.3 MB / 4 files
Download size: 1.4 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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