centrifugeR

0.1.7

Non-Trivial Balance of Centrifuge Rotors

0packages depend

2.6Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Duy Nghia PhamFirst published 2020-01-195 releasesCRAN page ↗GitHub ↗

Find the numbers of test tubes that can be balanced in centrifuge rotors and show various ways to load them. Refer to Pham (2020) doi:10.31224/osf.io/4xs38 for more information on package functionality.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("centrifugeR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("phamdn/centrifugeR")

Development version from phamdn/centrifugeR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-centrifuger

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-centrifugeR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-centrifugeR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 1.2 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 89%
References docs: 60%

Downloads

2.6K

CRAN downloads in the past year

Rank #16,071 · ~7/day · ~213/mo

Releases R versions

Daily download trend is not available in this view yet.

20930 days

67790 days

2.6K1 year

Compare downloads with other packages →

Also on260 r2u22 autocran

Repository

GitHub ↗ phamdn/centrifuger

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2024-08-31

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/phamdn/centrifuger on 2026-07-30.

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.2.0

Imports (6)

pracma shiny shinythemesgrDevicesgraphicsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Duy Nghia Pham

Author, Maintainer

Authors (1)

Duy Nghia Pham

Author, Maintainer

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.1.7Latest
2022-12-15 · current release · diff ↗
0.1.6
2022-06-23 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.1.5
2020-09-23 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.1.4
2020-04-17 · diff ↗
0.1.3
2020-01-19
R
R 3.6.0 released · 2019-04-26

Package metadata

First published: 2020-01-19
Total releases: 5 / 6 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.2.0
Download size: 54 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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