causalCmprsk

2.0.0

Nonparametric and Cox-Based Estimation of Average Treatment Effects in Competing Risks

0packages depend

3.3Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Bella Vakulenko-LagunFirst published 2020-11-036 releasesCRAN page ↗GitHub ↗

Estimation of average treatment effects (ATE) of point interventions on time-to-event outcomes with K competing risks (K can be 1). The method uses propensity scores and inverse probability weighting for emulation of baseline randomization, which is described in Charpignon et al. (2022) doi:10.1038/s41467-022-35157-w.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("causalCmprsk", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Bella2001/causalCmprsk")

Development version from Bella2001/causalCmprsk. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-causalcmprsk

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-causalCmprsk

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-causalCmprsk

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.0 min · r-oldrel-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 146 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 71%

Downloads

3.3K

CRAN downloads in the past year

Rank #14,135 · ~9/day · ~273/mo

Releases R versions

Daily download trend is not available in this view yet.

27830 days

74290 days

3.3K1 year

Compare downloads with other packages →

Also on111 r2u1 autocran

Repository

GitHub ↗ bella2001/causalcmprsk

3Stars

0Forks

0Open issues

0Open PRs

0Releases

45Commits

5Contributors

45 commits · Last activity 2023-07-04

Stars over time

2022-12-18 · 32026-07-07 · 3

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/bella2001/causalcmprsk on 2026-07-30.

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

18 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.0.0

Imports (9)

survivalinline doParallelparallelutilsforeach data.table purrrmethods

LinkingTo (0)

none

Suggests (13)

knitr rmarkdown bookdown tidyverse ggalt cobalt ggsci modEvA naniar DT Hmisc hrbrthemes summarytools

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (6)

Maintainer (1)

Bella Vakulenko-Lagun

Author, Maintainer

Authors (6)

Bella Vakulenko-Lagun

Author, Maintainer

Mark Albers

Author · added in 1.0.1

Marie-Laure Charpignon

Author

Sudeshna Das

Author

Colin Magdamo

Author

Bang Zheng

Author

Listed in earlier versions (1)

Mark W Albers

no longer listed · 1.0.0

Package Timeline

6 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
2.0.0Latest
2023-07-04 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
1.1.0
2023-03-31 · diff ↗
unarchivedReturned to CRAN
2023-03-31
R
R 4.2.0 released · 2022-04-22
archivedRemoved from CRAN
2022-04-04
'coercion to logical' errors were not corrected in time See https://www.stats.ox.ac.uk/pub/bdr/LENGTH1/
1.0.3
2021-08-09 · diff ↗
1.0.2
2021-08-09 · diff ↗
unarchivedReturned to CRAN
2021-08-09
archivedRemoved from CRAN
2021-08-08
check problems were not corrected in time
R
R 4.1.0 released · 2021-05-18
1.0.1
2021-01-05 · diff ↗
1.0.0
2020-11-03

Show 1 earlier events

R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-11-03
Total releases: 6 / 6 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.0.0
Download size: 289 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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