adjustedCurves

0.11.4

Confounder-Adjusted Survival Curves and Cumulative Incidence Functions

1packages depend

10.9Kdownloads / year

0.0%test coverage

11/13checks pass

Overview

About

Maintained by Robin DenzFirst published 2022-09-229 releasesCRAN page ↗GitHub ↗

Estimate and plot confounder-adjusted survival curves using either 'Direct Adjustment', 'Direct Adjustment with Pseudo-Values', various forms of 'Inverse Probability of Treatment Weighting', two forms of 'Augmented Inverse Probability of Treatment Weighting', 'Empirical Likelihood Estimation' or 'Targeted Maximum Likelihood Estimation'. Also includes a significance test for the difference between two adjusted survival curves and the calculation of adjusted restricted mean survival times. Additionally enables the user to estimate and plot cause-specific confounder-adjusted cumulative incidence functions in the competing risks setting using the same methods (with some exceptions). For details, see Denz et. al (2023) doi:10.1002/sim.9681.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("adjustedCurves", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("RobinDenz1/adjustedCurves")

Development version from RobinDenz1/adjustedCurves. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-adjustedcurves

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-adjustedCurves

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-adjustedCurves

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 14.5 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 2.66

0.0%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-07-11
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 362 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 85%

Downloads

10.9K

CRAN downloads in the past year

Rank #3,981 · ~30/day · ~912/mo

Releases R versions

Daily download trend is not available in this view yet.

89430 days

2.4K90 days

10.9K1 year

Compare downloads with other packages →

Also on225 r2u3 autocran1.3K conda_forge

Repository

GitHub ↗ robindenz1/adjustedcurves

47Stars

7Forks

4Open issues

0Open PRs

9Releases

237Commits

3Contributors

adjustedsurvival-curvescumulative-incidenceconfidence-intervals

License GPL-3.0 · 237 commits · Last activity 2026-05-29 · +4.4% stars, 30d

Stars over time

2025-05-10 · 372026-07-07 · 47

Repository practices

Upstream repositoryBeta

6 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/robindenz1/adjustedcurves on 2026-07-30.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Research and citation (1)

codemeta.json

Show all practices

Lint, format, editor (1)

RStudio project

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

27 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (7)

R.utils doParallel doRNG dplyr foreach rlangsurvival

LinkingTo (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

weightedsurv

Code & Tests

People & History

People (1)

Maintainer (1)

Robin Denz

Author, Maintainer

Authors (1)

Robin Denz

Author, Maintainer

Package Timeline

9 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.11.4Latest
2026-02-05 · current release · diff ↗
0.11.3
2025-07-13 · diff ↗
R
R 4.5.0 released · 2025-04-11
0.11.2
2024-07-29 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.11.1
2024-04-10 · diff ↗
0.11.0
2024-02-13 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.10.1
2023-04-20 · diff ↗
0.10.0
2023-02-16 · diff ↗
0.9.1
2022-11-22 · diff ↗
0.9.0
2022-09-22
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-09-22
Total releases: 9 / 4 yrs
License: GPL (>= 3) OSI
Download size: 914 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Report a problem with this page →