activAnalyzer

2.1.2

A 'Shiny' App to Analyze Accelerometer-Measured Daily Physical Behavior Data

0packages depend

5.1Kdownloads / year

51.0%test coverage

0/13checks pass

Overview

About

Maintained by Pierre-Yves de MüllenheimFirst published 2022-07-209 releasesCRAN page ↗GitHub ↗

A tool to analyse 'ActiGraph' accelerometer data and to implement the use of the PROactive Physical Activity in COPD (chronic obstructive pulmonary disease) instruments. Once analysis is completed, the app allows to export results to .csv files and to generate a report of the measurement. All the configured inputs relevant for interpreting the results are recorded in the report. In addition to the existing 'R' packages that are fully integrated with the app, the app uses some functions from the 'actigraph.sleepr' package developed by Petkova (2021) https://github.com/dipetkov/actigraph.sleepr/.

Latest changes · 2.1.2

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("activAnalyzer", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("pydemull/activAnalyzer")

Development version from pydemull/activAnalyzer. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-activanalyzer

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-activAnalyzer

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-activAnalyzer

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13NOTE

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc
NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc
NOTE r-devel-windows-x86_64
NOTE r-oldrel-macos-arm64
NOTE r-oldrel-macos-x86_64
NOTE r-oldrel-windows-x86_64
NOTE r-patched-linux-x86_64
NOTE r-release-linux-x86_64
NOTE r-release-macos-arm64
NOTE r-release-macos-x86_64
NOTE r-release-windows-x86_64

Slowest check: 10.2 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.20

51.0%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-06-09
0 OK · 13 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
0 OK · 12 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
3 OK · 11 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 745 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 69%
Documented parameters: 98%
Return-value docs: 100%
References docs: 6%

Downloads

5.1K

CRAN downloads in the past year

Rank #4,812 · ~14/day · ~424/mo

Releases R versions

Daily download trend is not available in this view yet.

1.2K30 days

1.9K90 days

5.1K1 year

Compare downloads with other packages →

Also on161 r2u83 autocran

Repository

GitHub ↗ pydemull/activanalyzer

4Stars

3Forks

2Open issues

0Open PRs

13Releases

661Commits

1Contributors

appshinyactigraphmonitoraccelerometerr

License GPL-3.0 · 661 commits · Last activity 2025-03-21

Stars over time

2024-10-14 · 42026-07-07 · 4

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/pydemull/activanalyzer on 2026-07-19.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

renv

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Show all practices

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

45 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.4.0

LinkingTo (0)

none

Suggests (19)

covr knitr spelling testthat processx globals config tidyselect DBI htmltools officer pkgload scales tibble rlang tinytex shinytest2 pkgdown callr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

R 22,281 (91%)Rd 1,711 (7%)Vignettes 377 (2%)

Code characteristics

Cyclomatic complexity: 2.0 median / 205 max
Test cases: 46 / 0.20 per code line

Test coverage

Line coverage

51%

Expression

22.1%

Tests / Examples

51.0% / 5% ex

Functions

69 30 exported

Complexity

8.4 avg / 205 max

Call network

69 nodes / 48 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

69 functions

Function	Cyclo	Coverage
run_app exp	1	0%
%\|NA\|%	2	0%
%\|\|%	2	0%
app_server	205	0%
col_1	1	0%
col_10	1	0%

People & History

People (1)

Maintainer (1)

Pierre-Yves de Müllenheim

Maintainer, Author

Authors (1)

Pierre-Yves de Müllenheim

Maintainer, Author

Package Timeline

9 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.1.2Latest
2024-09-24 · current release · diff ↗
2.1.1
2024-05-06 · diff ↗
2.1.0
2024-04-26 · diff ↗
R
R 4.4.0 released · 2024-04-24
2.0.2
2024-01-09 · diff ↗
R
R 4.3.0 released · 2023-04-21
2.0.1
2023-02-13 · diff ↗
2.0.0
2023-01-31 · diff ↗
1.1.0
2022-12-02 · diff ↗
1.0.5
2022-10-12 · diff ↗
1.0.4
2022-07-20
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-07-20
Total releases: 9 / 4 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.4.0
Download size: 3.0 MB
Installed size: not tracked yet
With dependencies: not tracked yet

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