SAFARI

0.1.0

Shape Analysis for AI-Reconstructed Images

0packages depend

2.5Kdownloads / year

–test coverage

12/13checks pass

Overview

About

Maintained by Esteban Fernandez MoralesFirst published 2021-02-251 releasesCRAN page ↗GitHub ↗

Provides functionality for image processing and shape analysis in the context of reconstructed medical images generated by deep learning-based methods or standard image processing algorithms and produced from different medical imaging types, such as X-ray, Computational Tomography (CT), Magnetic Resonance Imaging (MRI), and pathology imaging. Specifically, offers tools to segment regions of interest and to extract quantitative shape descriptors for applications in signal processing, statistical analysis and modeling, and machine learning.

Install

R (CRAN)pak (dev)Ubuntu (r2u)

install.packages("SAFARI", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("estfernandez/SAFARI")

Development version from estfernandez/SAFARI. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-safari

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 1.3 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-07-29
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-07-23
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 166 wordsVignettesNopkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 17%

Downloads

2.5K

CRAN downloads in the past year

Rank #17,996 · ~7/day · ~204/mo

Releases R versions

Daily download trend is not available in this view yet.

19130 days

60990 days

2.5K1 year

Compare downloads with other packages →

Also on94 r2u

Repository

GitHub ↗ estfernandez/safari

3Stars

2Forks

0Open issues

1Open PRs

2Releases

14Commits

2Contributors

rr-packageshape-analysisreconstructed-images

License GPL-3.0 · 14 commits · Last activity 2022-07-28

Stars over time

2025-05-02 · 32026-07-07 · 3

Repository practices

Upstream repositoryBeta

4 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/estfernandez/safari on 2026-07-31.

CRAN release process (1)

cran-comments.md

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (5)

caTools EBImagegraphicslatticepng

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Esteban Fernandez Morales

Author, Maintainer

Authors (2)

Esteban Fernandez Morales

Author, Maintainer

Qiwei Li

Author

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.1.0Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2021-02-25
Total releases: 1 / 5 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5.0
Bundled data: 5.0 KB / 1 file
Download size: 20 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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