RoME

0.2.3

Multiple Checks on MEDITS Trawl Survey Data

0packages depend

1.2Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Walter ZupaFirst published 2026-04-241 releasesCRAN page ↗

Provides quality checks for MEDITS (International Bottom Trawl Survey in the Mediterranean) trawl survey exchange data tables (TA (Haul data), TB (Catch data), TC (Biological data), TE (Biological individual data), TL (Litter data)). The main function RoME() calls all check functions in a defined sequence to perform a complete quality control of TX (Generic exchange data) data, including header validation, controlled-vocabulary checks, cross-table consistency tests, and biological plausibility checks. No automatic correction is applied: the package detects errors, warns the user, and specifies the type of error to ease data correction. Checks can be run simultaneously on multi-year datasets. An embedded 'shiny' application is also provided via run_RoME_app(). References describing the methods: MEDITS Working Group (2017) https://www.sibm.it/MEDITS%202011/principaledownload.htm.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("RoME", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rome

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-RoME

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-RoME

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 5.0 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

Dependencies · direct

Check history

OK2026-04-24
4 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · staticpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 74%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 82%

Downloads

1.2K

CRAN downloads in the past year

Rank #9,005 · ~3/day · ~102/mo

Releases R versions

Daily download trend is not available in this view yet.

26430 days

1.2K90 days

1.2K1 year

Compare downloads with other packages →

Also on15 r2u22 autocran

Dependencies

Declared dependencies

17 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.0

Imports (13)

timeDate stringr ggplot2 rnaturalearth rnaturalearthdata zip maps sp dplyr ggrepel magrittr geosphere shiny

LinkingTo (0)

none

Suggests (4)

knitr rmarkdown svDialogs shinyjs

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Code Composition

R 16,684 (83%)Rd 3,380 (17%)Vignettes 98 (0%)

Code characteristics

Cyclomatic complexity: 15.0 median / 574 max

Test coverage

Line coverage

–

Expression

–

Tests / Examples

–

Functions

71 0 exported

Complexity

39.9 avg / 574 max

Call network

71 nodes / 178 edges

Call graph

Open call graph →

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Datasets

Bundled datasets · 17

Name	Class	Rows × Cols	Also ships in
DataTargetSpecies	data.frame	1,318 × 24	–
GSAs	spec_tbl_df/tbl_df/tbl/data.frame	31 × 3	–
LW	data.frame	476 × 5	–
Maturity_parameters	data.frame	182 × 12	–
TA	data.frame	100 × 43	in 2 packages
TB	data.frame	3,059 × 19	in 2 packages
TC	data.frame	11,185 × 22	in 2 packages
TE	data.frame	3,801 × 25	–
TL	data.frame	177 × 14	–
TM_list	data.frame	1,617 × 11	–
assTL	data.frame	74 × 2	–
classes	data.frame	123 × 4	–
list_g1_g2	data.frame	88 × 17	–
mat_stages	data.frame	190 × 6	–
stratification_scheme	data.frame	474 × 7	–
stratification_scheme_rapana	data.frame	7 × 7	–
time	vector	–	–

People & History

People (5)

Maintainer (1)

Walter Zupa

Author, Maintainer

Authors (3)

Walter Zupa

Author, Maintainer

Isabella Bitetto

Author

Maria Teresa Spedicato

Author

Reviewers (2)

Loredana Casciaro

Reviewer

Cosmidano Neglia

Reviewer

Package Timeline

1 release. R releases are shown for context.

0.2.3Latest
2026-04-24 · current release
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-04-24
Total releases: 1 / 1 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.0
Bundled data: 1.7 MB / 23 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

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