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QuantNorm

Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection

v1.0.5 · Feb 1, 2019 · GPL (>= 2)

Description

Modifies the distance matrix obtained from data with batch effects, so as to improve the performance of sample pattern detection, such as clustering, dimension reduction, and construction of networks between subjects. The method has been published in Bioinformatics (Fei et al, 2018, <doi:10.1093/bioinformatics/bty117>). Also available on 'GitHub' <https://github.com/tengfei-emory/QuantNorm>.

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2 NOTE
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r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Teng Fei <tfei@emory.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Teng",
                      family = "Fei",
                      role = c("aut", "cre"),
                      email = "tfei@emory.edu"),
               person(given = "Tianwei",
                      family = "Yu",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Teng Fei <tfei@emory.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Teng",
                      family = "Fei",
                      role = c("aut", "cre"),
                      email = "tfei@emory.edu"),
               person(given = "Tianwei",
                      family = "Yu",
                      role = "aut"))
as necessary.
OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

*


            
OK r-oldrel-macos-arm64

*


            
OK r-oldrel-macos-x86_64

*


            
OK r-oldrel-windows-x86_64

*


            
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Teng Fei <tfei@emory.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Teng",
                      family = "Fei",
                      role = c("aut", "cre"),
                      email = "tfei@emory.edu"),
               person(given = "Tianwei",
                      family = "Yu",
                      role = "aut"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Teng Fei <tfei@emory.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Teng",
                      family = "Fei",
                      role = c("aut", "cre"),
                      email = "tfei@emory.edu"),
               person(given = "Tianwei",
                      family = "Yu",
                      role = "aut"))
as necessary.

Version History

new 1.0.5 Mar 9, 2026