PhysActBedRest
Marks Periods of 'Bedrest' in Actigraph Accelerometer Data
Description
Contains a function to categorize accelerometer readings collected in free-living (e.g., for 24 hours/day for 7 days), preprocessed and compressed as counts (unit-less value) in a specified time period termed epoch (e.g., 1 minute) as either bedrest (sleep) or active. The input is a matrix with a timestamp column and a column with number of counts per epoch. The output is the same dataframe with an additional column termed bedrest. In the bedrest column each line (epoch) contains a function-generated classification 'br' or 'a' denoting bedrest/sleep and activity, respectively. The package is designed to be used after wear/nonwear marking function in the 'PhysicalActivity' package. Version 1.1 adds preschool thresholds and corrects for possible errors in algorithm implementation.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
CRAN incoming feasibility
Maintainer: ‘J. Dustin Tracy <tracy@chapman.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("J.", "Dustin"),
family = "Tracy",
role = c("aut", "cre"),
email = "tracy@chapman.edu"),
person(given = "Zhiyi",
family = "Xu",
role = "aut"),
person(given = "Sari",
family = "Acra",
role = "aut"),
person(given = c("Kong", "Y."),
family = "Chen",
role = "aut"),
person(given = c("Maciej", "S."),
family = "Buchowski",
role = "aut"),
person(given = "Thomas",
family = "Donnelly",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘J. Dustin Tracy <tracy@chapman.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("J.", "Dustin"),
family = "Tracy",
role = c("aut", "cre"),
email = "tracy@chapman.edu"),
person(given = "Zhiyi",
family = "Xu",
role = "aut"),
person(given = "Sari",
family = "Acra",
role = "aut"),
person(given = c("Kong", "Y."),
family = "Chen",
role = "aut"),
person(given = c("Maciej", "S."),
family = "Buchowski",
role = "aut"),
person(given = "Thomas",
family = "Donnelly",
role = "aut"))
as necessary.
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Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
CRAN incoming feasibility
Maintainer: ‘J. Dustin Tracy <tracy@chapman.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("J.", "Dustin"),
family = "Tracy",
role = c("aut", "cre"),
email = "tracy@chapman.edu"),
person(given = "Zhiyi",
family = "Xu",
role = "aut"),
person(given = "Sari",
family = "Acra",
CRAN incoming feasibility
Maintainer: ‘J. Dustin Tracy <tracy@chapman.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("J.", "Dustin"),
family = "Tracy",
role = c("aut", "cre"),
email = "tracy@chapman.edu"),
person(given = "Zhiyi",
family = "Xu",
role = "aut"),
person(given = "Sari",
family = "Acra",