PersomicsArray

1.0

Automated Persomics Array Image Extraction

0packages depend

2.3Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by John SmestadFirst published 2016-09-261 releasesCRAN page ↗

Automated identification of printed array positions from high content microscopy images and the export of those positions as individual images written to output as multi-layered tiff files.

Install

R (CRAN)Ubuntu (r2u)openSUSE (OBS)

install.packages("PersomicsArray", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-persomicsarray

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-PersomicsArray

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.2 min · r-devel-linux-x86_64-fedora-clang

Check history

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

Documentation signals are not tracked yet for this package.

Downloads

2.3K

CRAN downloads in the past year

Rank #20,013 · ~6/day · ~189/mo

PersomicsArray Releases R versions

Daily download trend is not available in this view yet.

20030 days

58190 days

2.3K1 year

Compare downloads with other packages →

Also on95 r2u33 autocran

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Depends (9)

R >= 3.1.0grDevicesjpeg tiff stringr rasterutilsgraphicsstats

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

John Smestad

Author, Maintainer

Authors (1)

John Smestad

Author, Maintainer

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2016-09-26
Total releases: 1 / 10 yrs
License: GPL-3 OSI
Download size: 393 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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