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PLNmodels

Poisson Lognormal Models

v1.2.2 · Mar 21, 2025 · GPL (>= 3)

Description

The Poisson-lognormal model and variants (Chiquet, Mariadassou and Robin, 2021 <doi:10.3389/fevo.2021.588292>) can be used for a variety of multivariate problems when count data are at play, including principal component analysis for count data, discriminant analysis, model-based clustering and network inference. Implements variational algorithms to fit such models accompanied with a set of functions for visualization and diagnostic.

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CRAN Check Status

3 NOTE
11 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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NOTE r-oldrel-macos-arm64

installed package size

  installed size is 18.5Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    doc    2.4Mb
    libs  12.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is 18.6Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    doc    2.4Mb
    libs  13.1Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  7.0Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    doc    2.4Mb
    libs   1.6Mb
OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

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OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

installed package size

  installed size is 18.5Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    doc    2.4Mb
    libs  12.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is 18.6Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    doc    2.4Mb
    libs  13.1Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  7.0Mb
  sub-directories of 1Mb or more:
    data   1.4Mb
    doc    2.4Mb
    libs   1.6Mb

Dependency Network

Dependencies Reverse dependencies cli corrplot dplyr future future.apply ggplot2 glassoFast gridExtra igraph magrittr MASS Matrix nloptr pscl purrr +6 more dependencies PLNmodels

Version History

new 1.2.2 Mar 9, 2026