MALDIquant call graph
Each node is a function, tinted by its test coverage so untested, complex code stands out. Shape encodes language, a ring marks exported functions, and dashed edges are calls from R into compiled code. Hover a node for detail; click to focus its neighborhood.
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Coverage
89% lines
Expression
90.7%
Tests
88.7%
Examples
78.4%
Vignettes
not measured
By file
R/plot-methods.R
0%
R/Deprecated.R
0%
R/lines-methods.R
0%
R/points-methods.R
0%
R/plotMsiSlice-functions.R
23%
R/plotMsiSlice-methods.R
57%
R/calculateLabelPositions-functions.R
60%
R/labelPeaks-methods.R
60%
R/determineWarpingFunctions-functions.R
70%
R/binPeaks-functions.R
94%
R/filterPeaks-functions.R
100%
R/merge-functions.R
100%
Structure
- Functions
- 112
- Exported
- 20
- Compiled
- 8
- Call edges
- 112
Functions ranked by lowest coverage
| Function | Language | Lines | Cyclomatic | Coverage |
|---|---|---|---|---|
| .calculateLabelPositions | R | 19 | 2 | 0.0% |
| .msiLegend | R | 11 | 1 | 0.0% |
| .plotMsiSlice | R | 72 | 11 | 0.0% |
| .rasterSlice | R | 5 | 1 | 0.0% |
| .testLabelOverlap | R | 32 | 4 | 0.0% |
| .which.closest | R | 3 | 1 | 0.0% |
| determineWarpingFunctions exp | R | 216 | 23 | 70.3% |
| .binPeaks | R | 73 | 5 | 88.9% |
| .textLabelRects | R | 28 | 4 | 94.7% |
| alignSpectra exp | R | 17 | 1 | 100.0% |
| averageMassSpectra exp | R | 22 | 1 | 100.0% |
| binPeaks exp | R | 69 | 2 | 100.0% |
| createMassPeaks exp | R | 7 | 1 | 100.0% |
| createMassSpectrum exp | R | 4 | 1 | 100.0% |
| filterPeaks exp | R | 80 | 11 | 100.0% |
| findEmptyMassObjects exp | R | 8 | 1 | 100.0% |
| intensityMatrix exp | R | 27 | 4 | 100.0% |
| isMassPeaks exp | R | 3 | 1 | 100.0% |
| isMassPeaksList exp | R | 7 | 3 | 100.0% |
| isMassSpectrum exp | R | 3 | 1 | 100.0% |