LBSPR

0.1.6

Length-Based Spawning Potential Ratio

0packages depend

6.5Kdownloads / year

–test coverage

12/13checks pass

Overview

About

Maintained by Adrian HordykFirst published 2016-12-137 releasesCRAN page ↗GitHub ↗

Simulate expected equilibrium length composition, yield-per-recruit, and the spawning potential ratio (SPR) using the length-based SPR (LBSPR) model. Fit the LBSPR model to length data to estimate selectivity, relative apical fishing mortality, and the spawning potential ratio for data-limited fisheries. See Hordyk et al (2016) doi:10.1139/cjfas-2015-0422 for more information about the LBSPR assessment method.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("LBSPR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("AdrianHordyk/LBSPR")

Development version from AdrianHordyk/LBSPR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-lbspr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-LBSPR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-LBSPR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 3.2 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-22
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 67%
Documented parameters: 100%
Return-value docs: 79%
References docs: 4%

Downloads

6.5K

CRAN downloads in the past year

Rank #9,742 · ~18/day · ~541/mo

Releases R versions

Daily download trend is not available in this view yet.

34930 days

1.1K90 days

6.5K1 year

Compare downloads with other packages →

Also on374 r2u4 autocran

Repository

GitHub ↗ adrianhordyk/lbspr

9Stars

62Forks

4Open issues

0Open PRs

1Releases

164Commits

3Contributors

164 commits · Last activity 2023-07-13 · 0% stars, 30d

Stars over time

2025-03-22 · 82026-07-07 · 9

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/adrianhordyk/lbspr on 2026-07-31.

Continuous integration (2)

Travis CIAppVeyor

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.2.4

Imports (10)

dplyr ggplot2graphicsgridExtramethodsplotrix Rcpp RColorBrewer shiny tidyr

LinkingTo (1)

Rcpp

Suggests (5)

colorspace knitr scales shinyBS rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Adrian Hordyk

Author, Maintainer

Authors (1)

Adrian Hordyk

Author, Maintainer

Package Timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
0.1.6Latest
2021-10-06 · current release · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
0.1.5
2019-12-05 · diff ↗
0.1.4
2019-08-26 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.1.3
2019-03-12 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.1.2
2017-08-16 · diff ↗
0.1.1
2017-06-20 · diff ↗
R
R 3.4.0 released · 2017-04-21

Show 2 earlier events

0.1.0
2016-12-13
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-12-13
Total releases: 7 / 10 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.2.4
Download size: 613 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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