JSM

1.0.2

Semiparametric Joint Modeling of Survival and Longitudinal Data

0packages depend

2.6Kdownloads / year

73.3%test coverage

12/13checks pass

Overview

About

Maintained by Cong XuFirst published 2016-08-257 releasesCRAN page ↗

Maximum likelihood estimation for the semiparametric joint modeling of survival and longitudinal data. Refer to the Journal of Statistical Software article: doi:10.18637/jss.v093.i02.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("JSM", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-jsm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-JSM

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-JSM

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1NOTE12OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 8.8 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.05

73.3%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-04-22
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 62%
Documented parameters: 93%
Return-value docs: 100%
References docs: 60%

Downloads

2.6K

CRAN downloads in the past year

Rank #15,452 · ~7/day · ~215/mo

Releases R versions

Daily download trend is not available in this view yet.

21430 days

68390 days

2.6K1 year

Compare downloads with other packages →

Also on438 r2u3 autocran

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Depends (5)

R >= 3.0.0nlmesplinesstatmodsurvival

Imports (1)

Rcpp

LinkingTo (2)

Rcpp RcppEigen

Suggests (1)

testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Cong Xu

Author, Maintainer

Authors (3)

Cong Xu

Author, Maintainer

Pantelis Z. Hadjipantelis

Author

Jane-Ling Wang

Author

Listed in earlier versions (1)

Hadjipantelis

no longer listed · 1.0.2

Package Timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.2Latest
2025-06-09 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
1.0.1
2020-09-04 · diff ↗
unarchivedReturned to CRAN
2020-09-04
archivedRemoved from CRAN
2020-07-23
check problems were not corrected in time
R
R 4.0.0 released · 2020-04-24
1.0.0
2020-04-17 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.1.3
2018-05-07 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.1.2
2017-08-30 · diff ↗

Show 4 earlier events

0.1.1
2017-06-30 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.1.0
2016-08-25
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-08-25
Total releases: 7 / 10 yrs
License: BSD_3_clause + file LICENSE OSI
Minimum R: ≥ 3.0.0
Bundled data: 138 KB / 6 files
Download size: 187 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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