JMbayes

0.9-0

Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach

0packages depend

12.8Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Dimitris RizopoulosFirst published 2012-09-1726 releasesCRAN page ↗GitHub ↗

Shared parameter models for the joint modeling of longitudinal and time-to-event data using MCMC; Dimitris Rizopoulos (2016) doi:10.18637/jss.v072.i07.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("JMbayes", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("drizopoulos/JMbayes")

Development version from drizopoulos/JMbayes. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-jmbayes

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-JMbayes

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-JMbayes

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.5 min · r-devel-linux-x86_64-fedora-clang

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-04-22
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 1 earlier snapshots

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 645 wordsVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 87%
Return-value docs: 92%
References docs: 57%

Downloads

12.8K

CRAN downloads in the past year

Rank #6,702 · ~35/day · ~1.1K/mo

Releases R versions

Daily download trend is not available in this view yet.

50330 days

1.5K90 days

12.8K1 year

Compare downloads with other packages →

Also on461 r2u6 autocran82 c2d4u

Repository

GitHub ↗ drizopoulos/jmbayes

58Stars

24Forks

2Open issues

1Open PRs

1Releases

300Commits

6Contributors

joint-modelslongitudinal-responsessurvival-analysisprediction-model

300 commits · Last activity 2021-01-28

Stars over time

2025-01-30 · 582026-07-07 · 58

Repository practices

Upstream repositoryBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/drizopoulos/jmbayes on 2026-07-19.

Continuous integration (1)

Travis CI

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Depends (4)

nlmesurvivaldoParallel rstan

Imports (8)

MASSforeach Rcpp jagsUI xtable shinysplinesHmisc

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Dimitris Rizopoulos

Author, Maintainer

Authors (1)

Dimitris Rizopoulos

Author, Maintainer

Package Timeline

26 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.9-0Latest
2025-09-29 · current release · diff ↗
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R 4.5.0 released · 2025-04-11
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R 4.4.0 released · 2024-04-24
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R 4.3.0 released · 2023-04-21
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R 4.2.0 released · 2022-04-22
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R 4.1.0 released · 2021-05-18
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R 4.0.0 released · 2020-04-24
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R 3.6.0 released · 2019-04-26
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R 3.5.0 released · 2018-04-23
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Show 25 earlier events

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R 3.4.0 released · 2017-04-21
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R 3.3.0 released · 2016-05-03
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R 3.2.0 released · 2015-04-16
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R 3.1.0 released · 2014-04-10
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R 3.0.0 released · 2013-04-03
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2012-11-29 · diff ↗
0.2-0
2012-10-02 · diff ↗
0.1-1
2012-09-17
R
R 2.15.0 released · 2012-03-30

Package metadata

First published: 2012-09-17
Total releases: 26 / 14 yrs
License: GPL (>= 2) OSI
Bundled data: 125 KB / 6 files
Download size: 293 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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