Skip to content

IFC

Tools for Imaging Flow Cytometry

v0.2.1 · Sep 13, 2023 · GPL-3

Description

Contains several tools to treat imaging flow cytometry data from 'ImageStream®' and 'FlowSight®' cytometers ('Amnis®' 'Cytek®'). Provides an easy and simple way to read and write .fcs, .rif, .cif and .daf files. Information such as masks, features, regions and populations set within these files can be retrieved for each single cell. In addition, raw data such as images stored can also be accessed. Users, may hopefully increase their productivity thanks to dedicated functions to extract, visualize, manipulate and export 'IFC' data. Toy data example can be installed through the 'IFCdata' package of approximately 32 MB, which is available in a 'drat' repository <https://gitdemont.github.io/IFCdata/>. See file 'COPYRIGHTS' and file 'AUTHORS' for a list of copyright holders and authors.

Downloads

288

Last 30 days

10929th

288

Last 90 days

288

Last year

CRAN Check Status

3 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (16 non-OK)
OK r-devel-linux-x86_64-debian-clang

*


            
OK r-devel-linux-x86_64-debian-gcc

*


            
OK r-devel-linux-x86_64-fedora-clang

*


            
OK r-devel-linux-x86_64-fedora-gcc

*


            
OK r-devel-macos-arm64

*


            
OK r-devel-windows-x86_64

*


            
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  7.4Mb
  sub-directories of 1Mb or more:
    R      2.0Mb
    libs   4.6Mb
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘IFCdata’
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  7.5Mb
  sub-directories of 1Mb or more:
    R      2.0Mb
    libs   4.6Mb
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘IFCdata’
NOTE r-oldrel-windows-x86_64

package dependencies

Package suggested but not available for checking: 'IFCdata'
OK r-patched-linux-x86_64

*


            
OK r-release-linux-x86_64

*


            
OK r-release-macos-arm64

*


            
OK r-release-macos-x86_64

*


            
OK r-release-windows-x86_64

*


            

Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Package suggested but not available for checking: ‘IFCdata’
NOTE r-oldrel-macos-x86_64

package dependencies

Package suggested but not available for checking: ‘IFCdata’
NOTE r-oldrel-windows-x86_64

package dependencies

Package suggested but not available for checking: 'IFCdata'

Dependency Network

Dependencies Reverse dependencies Rcpp xml2 gridExtra gridGraphics lattice latticeExtra KernSmooth DT visNetwork IFC

Version History

new 0.2.1 Mar 9, 2026