GCalignR call graph
Loading call graph…
Coverage
67% lines
Expression
68.1%
Tests
66.6%
Examples
69.4%
Vignettes
57.6%
By file
R/peak_interspace.R
0%
R/blank_substraction.R
0%
R/merge_redundant_rows.R
0%
R/read_empower2.R
0%
R/remove_singletons.R
0%
R/align_peaks_fast.R
0%
R/as.data.frame.GCalign.R
0%
R/GC_Heatmap.R
56%
R/draw_chromatogram.R
59%
R/check_input.R
68%
R/choose_optimal_reference.R
71%
R/align_chromatograms.R
74%
Structure
- Functions
- 58
- Exported
- 15
- Compiled
- 0
- Call edges
- 41
Functions ranked by lowest coverage
| Function | Language | Lines | Cyclomatic | Coverage |
|---|---|---|---|---|
| merge_redundant_rows exp | R | 55 | 4 | 0.0% |
| peak_interspace exp | R | 98 | 12 | 0.0% |
| read_empower2 exp | R | 36 | 2 | 0.0% |
| remove_singletons exp | R | 19 | 4 | 0.0% |
| add_linshifts | R | 10 | 2 | 0.0% |
| add_linshifts2 | R | 8 | 2 | 0.0% |
| align_peaks_fast | R | 23 | 1 | 0.0% |
| as.data.frame.GCalign | R | 6 | 1 | 0.0% |
| blank_substraction | R | 80 | 11 | 0.0% |
| conc_max | R | 1 | 1 | 0.0% |
| delete_space_colnames | R | 4 | 1 | 0.0% |
| dummy_col | R | 6 | 1 | 0.0% |
| dummy_remove | R | 3 | 1 | 0.0% |
| peaks2chroma | R | 9 | 2 | 0.0% |
| time_cut | R | 6 | 1 | 0.0% |
| write_files | R | 13 | 2 | 0.0% |
| choose_optimal_reference exp | R | 34 | 7 | 53.3% |
| gc_heatmap exp | R | 189 | 23 | 55.7% |
| draw_chromatogram exp | R | 168 | 36 | 59.5% |
| is_redundant | R | 16 | 5 | 62.5% |