EMJMCMC

1.5.0

Evolutionary Mode Jumping Markov Chain Monte Carlo Expert Toolbox

0packages depend

2.3Kdownloads / year

52.3%test coverage

13/13checks pass

Overview

About

Maintained by Waldir LeoncioFirst published 2024-05-031 releasesCRAN page ↗

Implementation of the Mode Jumping Markov Chain Monte Carlo algorithm from Hubin, A., Storvik, G. (2018) doi:10.1016/j.csda.2018.05.020, Genetically Modified Mode Jumping Markov Chain Monte Carlo from Hubin, A., Storvik, G., & Frommlet, F. (2020) doi:10.1214/18-BA1141, Hubin, A., Storvik, G., & Frommlet, F. (2021) doi:10.1613/jair.1.13047, and Hubin, A., Heinze, G., & De Bin, R. (2023) doi:10.3390/fractalfract7090641, and Reversible Genetically Modified Mode Jumping Markov Chain Monte Carlo from Hubin, A., Frommlet, F., & Storvik, G. (2021) doi:10.48550/arXiv.2110.05316, which allow for estimating posterior model probabilities and Bayesian model averaging across a wide set of Bayesian models including linear, generalized linear, generalized linear mixed, generalized nonlinear, generalized nonlinear mixed, and logic regression models.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("EMJMCMC", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-emjmcmc

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-EMJMCMC

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-EMJMCMC

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 7.6 min · r-devel-linux-x86_64-fedora-clang

Code health

Yes

Tests · ratio 0.14

52.3%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-03-30
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-10
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 94%
Return-value docs: 100%
References docs: 5%

Downloads

2.3K

CRAN downloads in the past year

Rank #20,490 · ~6/day · ~191/mo

Releases R versions

Daily download trend is not available in this view yet.

20230 days

56090 days

2.3K1 year

Compare downloads with other packages →

Also on116 r2u35 autocran

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Depends (2)

R >= 3.4.1bigmemory

Imports (10)

glmnet biglm hash BAS stringiparallelmethodsspeedglmstatswithr

LinkingTo (0)

none

Suggests (4)

testthat bindata clusterGeneration reshape2

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (4)

Maintainer (1)

Waldir Leoncio

Maintainer, Author

Authors (2)

Waldir Leoncio

Maintainer, Author

Aliaksandr Hubin

Author

Contributors (2)

Florian Frommlet

Contributor

Geir Storvik

Contributor

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.5.0Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2024-05-03
Total releases: 1 / 2 yrs
License: GPL
Minimum R: ≥ 3.4.1
Download size: 130 KB
Installed size: not tracked yet
With dependencies: not tracked yet

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