CommonDataModel

1.0.1

OMOP CDM DDL and Documentation Generator

1packages depend

16.1Kdownloads / year

42.5%test coverage

13/13checks pass

Overview

About

Maintained by Clair BlacketerFirst published 2024-02-072 releasesCRAN page ↗

Generates the scripts required to create an Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) database and associated documentation for supported database platforms. Leverages the 'SqlRender' package to convert the Data Definition Language (DDL) script written in parameterized Structured Query Language (SQL) to the other supported dialects.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)

install.packages("CommonDataModel", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-commondatamodel

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-CommonDataModel

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

13OK

Slowest check: 3.3 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.42

42.5%

Coverage · measured lines

100%

Documentation · exports

Dependencies · direct

Check history

OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-06
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-04
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 1,147 wordsVignettesNopkgdown siteNoNEWSYes · 0% structuredCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 83%
Return-value docs: 100%
References docs: 0%

Downloads

16.1K

CRAN downloads in the past year

Rank #3,973 · ~44/day · ~1.3K/mo

Releases R versions

Daily download trend is not available in this view yet.

94230 days

2.4K90 days

16.1K1 year

Compare downloads with other packages →

Also on172 r2u

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Depends (3)

DatabaseConnector SqlRender rJava

Imports (5)

rmarkdown stringr DBI dplyr readr

LinkingTo (0)

none

Suggests (4)

knitr testthat RSQLite withr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Eunomia

Code & Tests

People & History

People (1)

Maintainer (1)

Clair Blacketer

Author, Maintainer

Authors (1)

Clair Blacketer

Author, Maintainer

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.0.1Latest
2024-10-01 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
0.2.0
2024-02-07
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2024-02-07
Total releases: 2 / 2 yrs
License: Apache License 2.0 OSI
Download size: 278 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Report a problem with this page →