Description
Curates biological sequences massively, quickly, without errors and without internet connection. Biological sequences curing is performed by aligning the forward and / or revers primers or ends of cloning vectors with the sequences to be cleaned. After the alignment, new subsequences are generated without biological fragment not desired by the user. Pozzi et al (2020) <doi:10.1007/s00438-020-01671-z>.
Downloads
263
Last 30 days
18590th
802
Last 90 days
3.6K
Last year
Trend: +16.9% (30d vs prior 30d)
0
Last 30 days
23
Last 90 days
172
Last year
Trend: -100% (30d vs prior 30d)
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
CRAN incoming feasibility
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Florencia", "I."),
family = "Pozzi",
role = c("aut", "cre"),
email = "florenciapoz@hotmail.com"),
person(given = c("Silvina", "A."),
family = "Felitti",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Florencia", "I."),
family = "Pozzi",
role = c("aut", "cre"),
email = "florenciapoz@hotmail.com"),
person(given = c("Silvina", "A."),
family = "Felitti",
role = "aut"))
as necessary.
Check History
NOTE 10 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
CRAN incoming feasibility
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Florencia", "I."),
family = "Pozzi",
role = c("aut", "cre"),
email = "florenciapoz@hotmail.com"),
person(given = c("Silvina", "A."),
family = "Felitti",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Florencia", "I."),
family = "Pozzi",
role = c("aut", "cre"),
email = "florenciapoz@hotmail.com"),
person(given = c("Silvina", "A."),
family = "Felitti",
role = "aut"))
as necessary.
ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 10, 2026
CRAN incoming feasibility
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Florencia", "I."),
family = "Pozzi",
role = c("aut", "cre"),
email = "florenciapoz@hotmail.com"),
person(given = c("Silvina", "A."),
family = "Felitti",
role = "aut"))
as necessary.
CRAN incoming feasibility
Maintainer: ‘Florencia I. Pozzi <florenciapoz@hotmail.com>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Florencia", "I."),
family = "Pozzi",
role = c("aut", "cre"),
email = "florenciapoz@hotmail.com"),
person(given = c("Silvina", "A."),
family = "Felitti",
role = "aut"))
as necessary.
package dependencies
Package required but not available: ‘pwalign’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
Code
Structure
Lines of code
283
Files
13
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
4
Internal functions
0
Recent export changes
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
100%
\dontrun example ratio
0%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
No
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
3
First release
2018-05-11
Latest release
2024-05-09
Avg cadence
1095 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.