CimpleG call graph
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Coverage
20% lines
covr status: test_error
Expression
23.2%
Tests
19.7%
Examples
not measured
Vignettes
not measured
By file
R/plot.R
0%
R/deconv_ranking_plot.R
0%
R/prep_summarizedexp_data.R
0%
R/deconv_pred_obs_plot.R
0%
R/fetch_cpg_annot.R
0%
R/mean_imput.R
0%
R/make_deconv_pred_obs_data.R
0%
R/helper_plot_functions.R
0%
R/about.R
0%
R/deconvolution.R
5%
R/helper_functions.R
21%
R/input_data_check_prep.R
32%
Structure
- Functions
- 66
- Exported
- 20
- Compiled
- 0
- Call edges
- 65
Functions ranked by lowest coverage
| Function | Language | Lines | Cyclomatic | Coverage |
|---|---|---|---|---|
| darken exp | R | 7 | 2 | 0.0% |
| deconv_pred_obs_plot exp | R | 67 | 1 | 0.0% |
| deconv_ranking_plot exp | R | 146 | 4 | 0.0% |
| deconvolution_barplot exp | R | 54 | 4 | 0.0% |
| diffmeans_sumvariance_plot exp | R | 428 | 23 | 0.0% |
| dmsv_plot exp | R | 15 | 1 | 0.0% |
| eval_test_data exp | R | 51 | 3 | 0.0% |
| get_cpg_annotation exp | R | 65 | 5 | 0.0% |
| lighten exp | R | 7 | 2 | 0.0% |
| make_color_palette exp | R | 19 | 3 | 0.0% |
| make_deconv_pred_obs_data exp | R | 46 | 2 | 0.0% |
| run_deconvolution exp | R | 9 | 1 | 0.0% |
| select_features exp | R | 3 | 1 | 0.0% |
| signature_plot exp | R | 15 | 1 | 0.0% |
| CimpleG.SummarizedExperiment | R | 92 | 5 | 0.0% |
| about | R | 19 | 1 | 0.0% |
| deconv_cpg | R | 72 | 2 | 0.0% |
| deconv_ml | R | 86 | 2 | 0.0% |
| deconvolution_corrplot | R | 55 | 3 | 0.0% |
| deconvolution_epidish | R | 21 | 1 | 0.0% |