CB2
CRISPR Pooled Screen Analysis using Beta-Binomial Test
v1.3.8
·
Jan 29, 2026
·
MIT + file LICENSE
Description
Provides functions for hit gene identification and quantification of sgRNA (single-guided RNA) abundances for CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) pooled screen data analysis. Details are in Jeong et al. (2019) <doi:10.1101/gr.245571.118> and Baggerly et al. (2003) <doi:10.1093/bioinformatics/btg173>.
Downloads
400
Last 30 days
8397th
806
Last 90 days
806
Last year
Trend: -1.5% (30d vs prior 30d)
CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
OK
r-devel-linux-x86_64-debian-clang
*
OK
r-devel-linux-x86_64-debian-gcc
*
OK
r-devel-linux-x86_64-fedora-clang
*
OK
r-devel-linux-x86_64-fedora-gcc
*
OK
r-devel-macos-arm64
*
OK
r-devel-windows-x86_64
*
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 6.4Mb
sub-directories of 1Mb or more:
data 1.5Mb
extdata 1.1Mb
libs 3.3Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 7.5Mb
sub-directories of 1Mb or more:
data 2.5Mb
extdata 1.1Mb
libs 3.4Mb
OK
r-oldrel-windows-x86_64
*
OK
r-patched-linux-x86_64
*
OK
r-release-linux-x86_64
*
OK
r-release-macos-arm64
*
OK
r-release-macos-x86_64
*
OK
r-release-windows-x86_64
*
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 6.4Mb
sub-directories of 1Mb or more:
data 1.5Mb
extdata 1.1Mb
libs 3.3Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 7.5Mb
sub-directories of 1Mb or more:
data 2.5Mb
extdata 1.1Mb
libs 3.4Mb
Dependency Network
Version History
new
1.3.8
Mar 9, 2026