BioMoR call graph
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Coverage
53% lines
covr status: test_error
Expression
47.8%
Tests
52.8%
Examples
not measured
Vignettes
not measured
By file
R/pipeline.R
0%
R/autoencoder.R
0%
R/calibrate.R
0%
R/train_biomor.R
0%
R/models.R
88%
R/benchamrk.R
92%
R/utils.R
100%
Structure
- Functions
- 12
- Exported
- 9
- Compiled
- 0
- Call edges
- 4
Functions ranked by lowest coverage
| Function | Language | Lines | Cyclomatic | Coverage |
|---|---|---|---|---|
| get_embeddings exp | R | 4 | 1 | 0.0% |
| prepare_model_data exp | R | 4 | 1 | 0.0% |
| train_autoencoder exp | R | 18 | 1 | 0.0% |
| biomor_run_pipeline | R | 43 | 2 | 0.0% |
| calibrate_model | R | 10 | 3 | 0.0% |
| train_biomor | R | 5 | 1 | 0.0% |
| biomor_benchmark exp | R | 23 | 2 | 91.7% |
| train_rf exp | R | 23 | 2 | 93.8% |
| train_xgb_caret exp | R | 23 | 2 | 93.8% |
| brier_score exp | R | 4 | 1 | 100.0% |
| compute_f1_threshold exp | R | 20 | 2 | 100.0% |
| get_cv_control exp | R | 10 | 1 | 100.0% |