BeastJar
JAR Dependency for MCMC Using 'BEAST'
Description
Provides JAR to perform Markov chain Monte Carlo (MCMC) inference using the popular Bayesian Evolutionary Analysis by Sampling Trees 'BEAST X' software library of Baele et al (2025) <doi:10.1038/s41592-025-02751-x>. 'BEAST X' supports auto-tuning Metropolis-Hastings, slice, Hamiltonian Monte Carlo and Sequential Monte Carlo sampling for a large variety of composable standard and phylogenetic statistical models using high performance computing. By placing the 'BEAST X' JAR in this package, we offer an efficient distribution system for 'BEAST X' use by other R packages using CRAN.
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CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 6, 2026
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 3, 2026
package dependencies
Package required but not available: ‘rJava’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual.
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb
installed package size
installed size is 8.6Mb
sub-directories of 1Mb or more:
java 8.6Mb