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Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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4,656

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3,810

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846

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5

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All (4,656) Software (2,418) Annotation (928) Experiment (436) Workflows (28)

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AnnotationWorkflow4 BasicWorkflow5 DifferentialSplicingWorkflow0 EpigeneticsWorkflow6 GeneExpressionWorkflow13 GenomicVariantsWorkflow0 ImmunoOncologyWorkflow20 ProteomicsWorkflow1 ResourceQueryingWorkflow2 SingleCellWorkflow10 SpatialWorkflow1 StatisticalMethod884 CustomArray2 SequenceAnnotation5
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Showing 1–13 of 13 packages

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EGSEA123 Bioc

Easy and efficient ensemble gene set testing with EGSEA

 current
ExpressionNormalizationWorkflow Bioc

Gene Expression Normalization Workflow

 current
GeoMxWorkflows Bioc

GeoMx Digital Spatial Profiler (DSP) data analysis workflows

 current
RNAseq123 Bioc

RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR

 current
RnaSeqGeneEdgeRQL Bioc

Gene-level RNA-seq differential expression and pathway analysis using Rsubread and the edgeR quasi-likelihood pipeline

 current
chipseqDB Bioc

A Bioconductor Workflow to Detect Differential Binding in ChIP-seq Data

 current
cytofWorkflow Bioc

CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets

 current
highthroughputassays Bioc

Using Bioconductor with High Throughput Assays

 current
rnaseqDTU Bioc

RNA-seq workflow for differential transcript usage following Salmon quantification

 current
rnaseqGene Bioc

RNA-seq workflow: gene-level exploratory analysis and differential expression

 current
sequencing Bioc

Introduction to Bioconductor for Sequence Data

 current
simpleSingleCell Bioc

A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor

 current
variants Bioc

Annotating Genomic Variants

 current