Bioconductor Packages

Sample data - Hapmap SNP 6.0 Affymetrix

Dowloads A Gene Expression Dataset From GEO And Checks If It Contains Data Of Healthy Controls Or Not

CellScore Standard Cell Types Expression Dataset [hgu133plus2]

Collection of publicly available imaging mass cytometry (IMC) datasets

DKFZ kidney package

Leukemia's microarray gene expression data (expressionSet).

Meta cohort survival data

Sigma mix MSQC1 data

MetaboLights MTBLS2: Comparative LC/MS-based profiling of silver nitrate-treated Arabidopsis thaliana leaves of wild-type and cyp79B2 cyp79B3 double knockout plants. Böttcher et al. (2004)

Multi-sample multi-group scRNA-seq data

ExperimentHub datasets for the nullranges package

Datasets and test data files for the plotgardener package

rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

Normalized gene expression dataset published by Wollbold et al. [2009] (WOLLBOLD).

Pre-processed data for use with the sampleClassifier package

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

Collection of Public Single-Cell Multiome (scATAC + scRNAseq) Datasets

Single-Cell Proteomics Data Package

Spatial allelic expression counts for fly cross embryo

Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010)

Tuberculosis Gene Expression Data for Machine Learning

Spellman et al. (1998) and Pramila/Breeden (2006) yeast cell cycle microarray data