Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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ChipManufacturer404 ChipName197 CustomArray2 CustomCDF0 CustomDBSchema10 FunctionalAnnotation30 Organism672 PackageType655 SequenceAnnotation5 ExonArray12 WorkflowStep1,321 WorkflowManagement1 StatisticalMethod884 ResearchField1,389 AssayDomain970

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Showing 51–100 of 203 packages

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Package	Category	Version	Last Release	Status
BSgenome.Ggallus.UCSC.galGal4.masked Bioc Full masked genome sequences for Gallus gallus (UCSC version galGal4)	annotation	1.3.99	3.23	current
BSgenome.Ggallus.UCSC.galGal5 Bioc Full genome sequences for Gallus gallus (UCSC version galGal5)	annotation	1.4.2	3.23	current
BSgenome.Ggallus.UCSC.galGal6 Bioc Full genome sequences for Gallus gallus (UCSC version galGal6)	annotation	1.4.2	3.23	current
BSgenome.Gmax.NCBI.Gmv40 Bioc Full genome sequences for Glycine max (Gmv40)	annotation	4.0	3.23	current
BSgenome.Hsapiens.1000genomes.hs37d5 Bioc 1000genomes Reference Genome Sequence (hs37d5)	annotation	0.99.1	3.23	current
BSgenome.Hsapiens.NCBI.GRCh38 Bioc Full genome sequences for Homo sapiens (GRCh38)	annotation	1.3.1000	3.23	current
BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 Bioc T2T-CHM13v2.0 assembly (Homo sapiens) wrapped in a BSgenome object	annotation	1.5.0	3.23	current
BSgenome.Hsapiens.UCSC.hg17 Bioc Full genome sequences for Homo sapiens (UCSC version hg17)	annotation	1.3.1001	3.23	current
BSgenome.Hsapiens.UCSC.hg17.masked Bioc Full masked genome sequences for Homo sapiens (UCSC version hg17)	annotation	1.3.999	3.23	current
BSgenome.Hsapiens.UCSC.hg18 Bioc Full genome sequences for Homo sapiens (UCSC version hg18)	annotation	1.3.1000	3.23	current
BSgenome.Hsapiens.UCSC.hg18.masked Bioc Full masked genome sequences for Homo sapiens (UCSC version hg18)	annotation	1.3.99	3.23	current
BSgenome.Hsapiens.UCSC.hg19 Bioc Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)	annotation	1.4.3	3.23	current
BSgenome.Hsapiens.UCSC.hg19.masked Bioc Full masked genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)	annotation	1.3.993	3.23	current
BSgenome.Hsapiens.UCSC.hg38 Bioc Full genomic sequences for Homo sapiens (UCSC genome hg38)	annotation	1.4.5	3.23	current
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major Bioc Full genome sequences for Homo sapiens (UCSC version hg38, based on GRCh38.p12) with injected major alleles (dbSNP151)	annotation	0.0.9999	3.23	current
BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor Bioc Full genome sequences for Homo sapiens (UCSC version hg38, based on GRCh38.p12) with injected minor alleles (dbSNP151)	annotation	0.0.9999	3.23	current
BSgenome.Hsapiens.UCSC.hg38.masked Bioc Full masked genomic sequences for Homo sapiens (UCSC version hg38)	annotation	1.4.5	3.23	current
BSgenome.Hsapiens.UCSC.hs1 Bioc Full genomic sequences for UCSC genome hs1 (Homo sapiens)	annotation	1.4.4	3.23	current
BSgenome.Mdomestica.UCSC.monDom5 Bioc Full genome sequences for Monodelphis domestica (UCSC version monDom5)	annotation	1.4.2	3.23	current
BSgenome.Mfascicularis.NCBI.5.0 Bioc Full genome sequences for Macaca fascicularis (Macaca_fascicularis_5.0)	annotation	1.4.2	3.23	current
BSgenome.Mfascicularis.NCBI.6.0 Bioc Full genome sequences for Macaca fascicularis (Macaca_fascicularis_6.0)	annotation	1.5.0	3.23	current
BSgenome.Mfuro.UCSC.musFur1 Bioc Full genome sequences for Mustela putorius furo (UCSC version musFur1)	annotation	1.4.1	3.23	current
BSgenome.Mmulatta.UCSC.rheMac10 Bioc Full genome sequences for Macaca mulatta (UCSC version rheMac10)	annotation	1.4.2	3.23	current
BSgenome.Mmulatta.UCSC.rheMac2 Bioc Full genome sequences for Macaca mulatta (UCSC version rheMac2)	annotation	1.4.0	3.23	current
BSgenome.Mmulatta.UCSC.rheMac2.masked Bioc Full masked genome sequences for Macaca mulatta (UCSC version rheMac2)	annotation	1.3.99	3.23	current
BSgenome.Mmulatta.UCSC.rheMac3 Bioc Full genome sequences for Macaca mulatta (UCSC version rheMac3)	annotation	1.4.0	3.23	current
BSgenome.Mmulatta.UCSC.rheMac3.masked Bioc Full masked genome sequences for Macaca mulatta (UCSC version rheMac3)	annotation	1.3.99	3.23	current
BSgenome.Mmulatta.UCSC.rheMac8 Bioc Full genome sequences for Macaca mulatta (UCSC version rheMac8)	annotation	1.4.2	3.23	current
BSgenome.Mmusculus.UCSC.mm10 Bioc Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)	annotation	1.4.3	3.23	current
BSgenome.Mmusculus.UCSC.mm10.masked Bioc Full masked genome sequences for Mus musculus (UCSC genome mm10, based on GRCm38.p6)	annotation	1.4.3	3.23	current
BSgenome.Mmusculus.UCSC.mm39 Bioc Full genome sequences for Mus musculus (UCSC genome mm39, based on GRCm39)	annotation	1.4.3	3.23	current
BSgenome.Mmusculus.UCSC.mm8 Bioc Full genome sequences for Mus musculus (UCSC version mm8)	annotation	1.4.0	3.23	current
BSgenome.Mmusculus.UCSC.mm8.masked Bioc Full masked genome sequences for Mus musculus (UCSC version mm8)	annotation	1.3.99	3.23	current
BSgenome.Mmusculus.UCSC.mm9 Bioc Full genome sequences for Mus musculus (UCSC version mm9)	annotation	1.4.0	3.23	current
BSgenome.Mmusculus.UCSC.mm9.masked Bioc Full masked genome sequences for Mus musculus (UCSC version mm9)	annotation	1.3.99	3.23	current
BSgenome.Osativa.MSU.MSU7 Bioc Oryza sativa full genome (MSU7)	annotation	0.99.2	3.23	current
BSgenome.Ppaniscus.UCSC.panPan1 Bioc Full genome sequences for Pan paniscus (UCSC version panPan1)	annotation	1.4.3	3.23	current
BSgenome.Ppaniscus.UCSC.panPan2 Bioc Full genome sequences for Pan paniscus (UCSC version panPan2)	annotation	1.4.3	3.23	current
BSgenome.Ptroglodytes.UCSC.panTro2 Bioc Full genome sequences for Pan troglodytes (UCSC version panTro2)	annotation	1.4.0	3.23	current
BSgenome.Ptroglodytes.UCSC.panTro2.masked Bioc Full masked genome sequences for Pan troglodytes (UCSC version panTro2)	annotation	1.3.99	3.23	current
BSgenome.Ptroglodytes.UCSC.panTro3 Bioc Full genome sequences for Pan troglodytes (UCSC version panTro3)	annotation	1.4.0	3.23	current
BSgenome.Ptroglodytes.UCSC.panTro3.masked Bioc Full masked genome sequences for Pan troglodytes (UCSC version panTro3)	annotation	1.3.99	3.23	current
BSgenome.Ptroglodytes.UCSC.panTro5 Bioc Full genome sequences for Pan troglodytes (UCSC version panTro5)	annotation	1.4.2	3.23	current
BSgenome.Ptroglodytes.UCSC.panTro6 Bioc Full genome sequences for Pan troglodytes (UCSC version panTro6)	annotation	1.4.2	3.23	current
BSgenome.Rnorvegicus.UCSC.rn4 Bioc Full genome sequences for Rattus norvegicus (UCSC version rn4)	annotation	1.4.0	3.23	current
BSgenome.Rnorvegicus.UCSC.rn4.masked Bioc Full masked genome sequences for Rattus norvegicus (UCSC version rn4)	annotation	1.3.99	3.23	current
BSgenome.Rnorvegicus.UCSC.rn5 Bioc Full genome sequences for Rattus norvegicus (UCSC version rn5)	annotation	1.4.0	3.23	current
BSgenome.Rnorvegicus.UCSC.rn5.masked Bioc Full masked genome sequences for Rattus norvegicus (UCSC version rn5)	annotation	1.3.99	3.23	current
BSgenome.Rnorvegicus.UCSC.rn6 Bioc Full genome sequences for Rattus norvegicus (UCSC version rn6)	annotation	1.4.1	3.23	current
BSgenome.Rnorvegicus.UCSC.rn7 Bioc Full genome sequences for Rattus norvegicus (UCSC genome rn7)	annotation	1.4.3	3.23	current