Bioconductor Packages

4,656 packages in the Bioconductor catalogue.

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ChipManufacturer404 ChipName197 CustomArray2 CustomCDF0 CustomDBSchema10 FunctionalAnnotation30 Organism672 PackageType655 SequenceAnnotation5 ExonArray12 WorkflowStep1,321 BiologicalQuestion1,034

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Showing 1–50 of 420 packages

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Package	Category	Version	First Release	Last Release	Status
AHEnsDbs Bioc EnsDbs for AnnotationHub	annotation	1.7.0	3.15	3.23	current
EPICv2manifest Bioc Illumina Infinium MethylationEPIC v2.0 extended manifest from Peters et al. 2024	annotation	0.99.7	3.19	3.23	current
GGHumanMethCancerPanelv1.db Bioc Illumina Golden Gate Human Methylation Cancer Panel Version 1 annotation data (chip GGHumanMethCancerPanelv1)	annotation	1.4.1		3.23	current
HsAgilentDesign026652.db Bioc Agilent Chips that use Agilent design number 026652 annotation data (chip HsAgilentDesign026652)	annotation	3.2.3		3.23	current
Hspec Bioc Hspec	annotation	0.99.1		3.23	current
HuExExonProbesetLocation Bioc Probe sequence data for microarrays of type HuEx	annotation	1.15.0		3.23	current
HuExExonProbesetLocationHg18 Bioc Exon-level probeset chromosome location for microarrays of type HuEx	annotation	0.0.2		3.23	current
HuExExonProbesetLocationHg19 Bioc Exon-level probeset chromosome location for microarrays of type HuEx	annotation	0.0.3		3.23	current
HuO22.db Bioc FHCRC Genomics Shared Resource HuO22 Annotation Data (HuO22)	annotation	3.2.3		3.23	current
IlluminaHumanMethylation27k.db Bioc Illumina Illumina Human Methylation 27k annotation data (chip IlluminaHumanMethylation27k)	annotation	1.4.8		3.23	current
IlluminaHumanMethylation27kanno.ilmn12.hg19 Bioc Annotation for Illumina's 27k methylation arrays	annotation	0.6.0		3.23	current
IlluminaHumanMethylation27kmanifest Bioc Annotation for Illumina's 27k methylation arrays	annotation	0.4.0		3.23	current
IlluminaHumanMethylation450kanno.ilmn12.hg19 Bioc Annotation for Illumina's 450k methylation arrays	annotation	0.6.1		3.23	current
IlluminaHumanMethylation450kmanifest Bioc Annotation for Illumina's 450k methylation arrays	annotation	0.4.0		3.23	current
IlluminaHumanMethylationEPICanno.ilm10b2.hg19 Bioc Annotation for Illumina's EPIC methylation arrays	annotation	0.6.0		3.23	current
IlluminaHumanMethylationEPICanno.ilm10b3.hg19 Bioc Annotation for Illumina's EPIC methylation arrays	annotation	0.6.0		3.23	current
IlluminaHumanMethylationEPICanno.ilm10b4.hg19 Bioc Annotation for Illumina's EPIC methylation arrays	annotation	0.6.0		3.23	current
IlluminaHumanMethylationEPICmanifest Bioc Manifest for Illumina's EPIC methylation arrays	annotation	0.3.0		3.23	current
IlluminaHumanMethylationEPICv2anno.20a1.hg38 Bioc Annotation for Illumina's EPIC v2.0 methylation arrays	annotation	1.0.1		3.23	current
IlluminaHumanMethylationEPICv2manifest Bioc Manifest for Illumina's EPIC v2.0 methylation arrays	annotation	1.0.1		3.23	current
IlluminaHumanMethylationMSAanno.ilm10a1.hg38 Bioc Annotation for Illumina's MSA methylation arrays	annotation	0.1.0		3.23	current
IlluminaHumanMethylationMSAmanifest Bioc Package for MSA Infinium array compatibility with minfi	annotation	0.1.1		3.23	current
JazaeriMetaData.db Bioc A data package containing annotation data for JazaeriMetaData	annotation	3.2.3		3.23	current
MmAgilentDesign026655.db Bioc Agilent Chips that use Agilent design number 026655 annotation data (chip MmAgilentDesign026655)	annotation	3.2.3		3.23	current
MoExExonProbesetLocation Bioc Probe sequence data for microarrays of type MoEx	annotation	1.15.0		3.23	current
Mu15v1.db Bioc FHCRC Genomics Shared Resource Mu15v1 Annotation Data (Mu15v1)	annotation	3.2.3		3.23	current
Mu22v3.db Bioc FHCRC Genomics Shared Resource Mu22v3 Annotation Data (Mu22v3)	annotation	3.2.3		3.23	current
Norway981.db Bioc Norway981 http://genome-www5.stanford.edu/ Annotation Data (Norway981)	annotation	3.2.3		3.23	current
OperonHumanV3.db Bioc FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3)	annotation	3.2.3		3.23	current
PartheenMetaData.db Bioc PartheenMetaData http://swegene.onk.lu.se Annotation Data (PartheenMetaData)	annotation	3.2.3		3.23	current
RaExExonProbesetLocation Bioc Probe sequence data for microarrays of type RaEx	annotation	1.15.0		3.23	current
RnAgilentDesign028282.db Bioc Agilent Chips that use Agilent design number 028282 annotation data (chip RnAgilentDesign028282)	annotation	3.2.3		3.23	current
Roberts2005Annotation.db Bioc Roberts2005Annotation Annotation Data (Roberts2005Annotation)	annotation	3.2.3		3.23	current
SHDZ.db Bioc SHDZ http://genome-www5.stanford.edu/ Annotation Data (SHDZ)	annotation	3.2.3		3.23	current
adme16cod.db Bioc Codelink ADME Rat 16-Assay Bioarray annotation data (chip adme16cod)	annotation	3.4.0		3.23	current
ag.db Bioc Affymetrix Affymetrix AG Array annotation data (chip ag)	annotation	3.13.0		3.23	current
agcdf Bioc agcdf	annotation	2.18.0		3.23	current
agprobe Bioc Probe sequence data for microarrays of type ag	annotation	2.18.0		3.23	current
ath1121501.db Bioc Affymetrix Affymetrix ATH1-121501 Array annotation data (chip ath1121501)	annotation	3.13.0		3.23	current
ath1121501cdf Bioc ath1121501cdf	annotation	2.18.0		3.23	current
ath1121501frmavecs Bioc Vectors used by frma for microarrays of type ath1121501	annotation	1.0.0		3.23	current
ath1121501probe Bioc Probe sequence data for microarrays of type ath1121501	annotation	2.18.0		3.23	current
barley1cdf Bioc barley1cdf	annotation	2.18.0		3.23	current
barley1probe Bioc Probe sequence data for microarrays of type barley1	annotation	2.18.0		3.23	current
bovine.db Bioc Affymetrix Affymetrix Bovine Array annotation data (chip bovine)	annotation	3.13.0		3.23	current
bovinecdf Bioc bovinecdf	annotation	2.18.0		3.23	current
bovineprobe Bioc Probe sequence data for microarrays of type bovine	annotation	2.18.0		3.23	current
bsubtiliscdf Bioc bsubtiliscdf	annotation	2.18.0		3.23	current
bsubtilisprobe Bioc Probe sequence data for microarrays of type bsubtilis	annotation	2.18.0		3.23	current
canine.db Bioc Affymetrix Affymetrix Canine Array annotation data (chip canine)	annotation	3.13.0		3.23	current