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rqt

Bioc current

rqt: utilities for gene-level meta-analysis

v1.38.0 · software · GPL
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Release Lineage

Entered 3.5 · Apr 25, 2017

Current · Requires R 4.6

1.0 In 19 of 49 releases 3.23

Description

Despite the recent advances of modern GWAS methods, it still remains an important problem of addressing calculation an effect size and corresponding p-value for the whole gene rather than for single variant. The R- package rqt offers gene-level GWAS meta-analysis. For more information, see: "Gene-set association tests for next-generation sequencing data" by Lee et al (2016), Bioinformatics, 32(17), i611-i619, <doi:10.1093/bioinformatics/btw429>.

Code

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Topics

Software › BiologicalQuestion › GenomeWideAssociation
Software › StatisticalMethod › Regression
Software › StatisticalMethod › Survival
Software › StatisticalMethod › PrincipalComponent
Software › StatisticalMethod
Software › Technology › Sequencing

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