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ngsReports

Bioc current

Load FastqQC reports and other NGS related files

v2.14.0 · software · LGPL-3
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Release Lineage

Entered 3.9 · May 3, 2019

Current · Requires R 4.6

1.0 In 15 of 49 releases 3.23

Description

This package provides methods and object classes for parsing FastQC reports and output summaries from other NGS tools into R. As well as parsing files, multiple plotting methods have been implemented for visualising the parsed data. Plots can be generated as static ggplot objects or interactive plotly objects.

Code & tests

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Topics

Software › WorkflowStep › QualityControl
Software › WorkflowStep › ReportWriting

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