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gscreend

Bioc current

Analysis of pooled genetic screens

v1.26.0 · software · GPL-3
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.10 · Oct 30, 2019

Current · Requires R 4.6

1.0 In 14 of 49 releases 3.23

Description

Package for the analysis of pooled genetic screens (e.g. CRISPR-KO). The analysis of such screens is based on the comparison of gRNA abundances before and after a cell proliferation phase. The gscreend packages takes gRNA counts as input and allows detection of genes whose knockout decreases or increases cell proliferation.

Code

Code metrics have not been computed for this package yet.

Topics

Software
Software › StatisticalMethod
Software › Technology › Sequencing › PooledScreens
Software › Technology › CRISPR

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