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a4Preproc

Bioc current

Automated Affymetrix Array Analysis Preprocessing Package

v1.60.0 · software · GPL-3

Release Lineage

Entered 2.8 · Apr 14, 2011

Current · Requires R 4.6

1.0 In 31 of 49 releases 3.23

Description

Utility functions to pre-process data for the Automated Affymetrix Array Analysis set of packages.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

1 1 exported

Complexity

2 avg / 2 max

Call network

1 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

168

Files

8

Compiled share

0%

Has compiled src

No

Language breakdown

R 67 (39.9%)Docs 51 (30.4%)Vignettes 50 (29.8%)

API

Exported functions

1

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

12

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

31

First release

2011-04-14

Latest release

2026-04-28

Avg cadence

183 days

Cold removal rate

Dep drift

4

LOC over versions

v2.8: 77 LOCv2.9: 77 LOCv2.10: 77 LOCv2.11: 77 LOCv2.12: 77 LOCv2.13: 77 LOCv2.14: 77 LOCv3.0: 77 LOCv3.1: 77 LOCv3.2: 77 LOCv3.3: 77 LOCv3.4: 77 LOCv3.5: 77 LOCv3.6: 77 LOCv3.7: 77 LOCv3.8: 77 LOCv3.9: 77 LOCv3.10: 77 LOCv3.11: 77 LOCv3.12: 168 LOCv3.13: 168 LOCv3.14: 168 LOCv3.15: 168 LOCv3.16: 168 LOCv3.17: 168 LOCv3.18: 168 LOCv3.19: 168 LOCv3.20: 168 LOCv3.21: 168 LOCv3.22: 168 LOCv3.23: 168 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (4)

Bioconductor (4)

People