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Rhisat2

Bioc current

R Wrapper for HISAT2 Aligner

v1.28.0 · software · GPL-3
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Release Lineage

Entered 3.9 · May 3, 2019

Current · Requires R 4.6

1.0 In 15 of 49 releases 3.23

Description

An R interface to the HISAT2 spliced short-read aligner by Kim et al. (2015). The package contains wrapper functions to create a genome index and to perform the read alignment to the generated index.

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Topics

Software › WorkflowStep › Alignment
Software › Technology › Sequencing
Software › BiologicalQuestion › SplicedAlignment

Depended on by (4)

Bioconductor (4)

CircSeqAlignTk eisaR QuasR pathwrap

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