R Observatory: Metrics for Rhisat version 0.99.15

Balamuta, James Joseph

Rhisat

Bioc removed

An R Wrapper for Hisat

v0.99.15 · GPL (>= 3)

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Release Lineage

Release history unavailable.

Description

An R interface to the HISAT short-anchored reads aligner by Kim D. et al. (2015). The package includes functionality for creating genome index and performing the alignment of the reads.

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Code

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Topics

Software › Technology › Sequencing

Software › WorkflowStep › Alignment

Software › Technology › Sequencing › RNASeq

Software › BiologicalQuestion › SplicedAlignment

People

Qixiu Du author maintainer
Zheng Wei author

Cite

Cite this package

Start here. This is the citation for the package itself.

citation("Rhisat")

Bioconductor packages have no CRAN DOI. The package landing page is https://bioconductor.org/packages/Rhisat.

BibTeX, derived from DESCRIPTION

@Manual{Rhisat,
  title  = {Rhisat: An R Wrapper for Hisat},
  author = {Du, Qixiu and Wei, Zheng},
  note   = {R package version 0.99.15},
  url    = {https://bioconductor.org/packages/Rhisat}
}

Derived from the package DESCRIPTION, not from a citation file the authors wrote. If they publish one later, prefer it.

This is the citation for the package. It is not a citation for the R Observatory.

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Use this when the claim is about a measurement on this page.

BibTeX

@misc{robservatoryRhisat,
  author    = {Balamuta, James Joseph},
  title     = {{R} {Observatory}: Metrics for {Rhisat} version 0.99.15},
  year      = {2026},
  publisher = {HJJB, LLC},
  url       = {https://r-observatory.thecoatlessprofessor.com/bioc/Rhisat},
  note      = {Data set. Data release v2026-08-05}
}

APA

Balamuta, J. J. (2026). R Observatory: Metrics for Rhisat version 0.99.15 [Data set]. HJJB, LLC. Data release v2026-08-05. https://r-observatory.thecoatlessprofessor.com/bioc/Rhisat

RIS

TY  - DATA
AU  - Balamuta, James Joseph
TI  - R Observatory: Metrics for Rhisat version 0.99.15
PY  - 2026
PB  - HJJB, LLC
N1  - Data release v2026-08-05
UR  - https://r-observatory.thecoatlessprofessor.com/bioc/Rhisat
ER  -

In prose

These package metrics were obtained from the R Observatory (Balamuta, 2026), data release v2026-08-05, https://r-observatory.thecoatlessprofessor.com/bioc/Rhisat.

Bound to data release v2026-08-05, which is what makes the numbers on this page reproducible. See how to cite.

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