MSstatsTMT

Description

The package provides statistical tools for detecting differentially abundant proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling. It provides multiple functionalities, including aata visualization, protein quantification and normalization, and statistical modeling and inference. Furthermore, it is inter-operable with other data processing tools, such as Proteome Discoverer, MaxQuant, OpenMS and SpectroMine.

Code

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Topics

Depended on by (4)

People

• Devon Kohler author maintainer
• Meena Choi author
• Sicheng Hao author
• Ting Huang author
• Deril Raju author
• Mateusz Staniak author
• Olga Vitek author
• Tony Wu author