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MMUPHin

Bioc current

Meta-analysis Methods with Uniform Pipeline for Heterogeneity in Microbiome Studies

v2.0.0 · software · MIT + file LICENSE
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Release Lineage

Entered 3.10 · Oct 30, 2019

Current · Requires R 4.6

1.0 In 14 of 49 releases 3.23

Description

MMUPHin is an R package for meta-analysis tasks of microbiome cohorts. It has function interfaces for: a) covariate-controlled batch- and cohort effect adjustment, b) meta-analysis differential abundance testing, c) meta-analysis unsupervised discrete structure (clustering) discovery, and d) meta-analysis unsupervised continuous structure discovery.

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Topics

Software › ResearchField › Metagenomics
Software › Technology › Sequencing › Microbiome
Software › WorkflowStep › BatchEffect

People

Siyuan MA