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KinSwingR

Bioc current

KinSwingR: network-based kinase activity prediction

v1.30.0 · software · GPL-3
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Release Lineage

Entered 3.8 · Oct 31, 2018

Current · Requires R 4.6

1.0 In 16 of 49 releases 3.23

Description

KinSwingR integrates phosphosite data derived from mass-spectrometry data and kinase-substrate predictions to predict kinase activity. Several functions allow the user to build PWM models of kinase-subtrates, statistically infer PWM:substrate matches, and integrate these data to infer kinase activity.

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Topics

Software › ResearchField › Proteomics
Software › BiologicalQuestion › SequenceMatching
Software › WorkflowStep › Visualization › Network

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