Skip to content

IONiseR

Bioc current

Quality Assessment Tools for Oxford Nanopore MinION data

v2.35.0 · software · MIT + file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 3.2 · Oct 14, 2015

Current · Requires R 4.6

1.0 In 22 of 49 releases 3.23

Description

IONiseR provides tools for the quality assessment of Oxford Nanopore MinION data. It extracts summary statistics from a set of fast5 files and can be used either before or after base calling. In addition to standard summaries of the read-types produced, it provides a number of plots for visualising metrics relative to experiment run time or spatially over the surface of a flowcell.

Call graph

Open call graph →

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Software › WorkflowStep › QualityControl
Software › Infrastructure › DataImport
Software › Technology › Sequencing

People