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GeneNetworkBuilder

Bioc current

GeneNetworkBuilder: a bioconductor package for building regulatory network using ChIP-chip/ChIP-seq data and Gene Expression Data

v1.54.0 · software · GPL (>= 2)
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Release Lineage

Entered 2.11 · Oct 3, 2012

Current · Requires R 4.6

1.0 In 28 of 49 releases 3.23

Description

Appliation for discovering direct or indirect targets of transcription factors using ChIP-chip or ChIP-seq, and microarray or RNA-seq gene expression data. Inputting a list of genes of potential targets of one TF from ChIP-chip or ChIP-seq, and the gene expression results, GeneNetworkBuilder generates a regulatory network of the TF.

Code

Code metrics have not been computed for this package yet.

Topics

Software › Technology › Sequencing
Software › Technology › Microarray
Software › StatisticalMethod › GraphAndNetwork

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