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DeconRNASeq

Bioc current

Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data

v1.53.1 · software · GPL-2
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Release Lineage

Entered 2.11 · Oct 3, 2012

Current · Requires R 4.6

1.0 In 28 of 49 releases 3.23

Description

DeconSeq is an R package for deconvolution of heterogeneous tissues based on mRNA-Seq data. It modeled expression levels from heterogeneous cell populations in mRNA-Seq as the weighted average of expression from different constituting cell types and predicted cell type proportions of single expression profiles.

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Topics

Software › BiologicalQuestion › DifferentialExpression

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Ting Gong