Skip to content

BiGGR

Bioc removed

Constraint based modeling in R using metabolic reconstruction databases

v1.46.0 · file LICENSE
View on Bioconductor ↗ Source ↗

Release Lineage

Entered 2.13 · Oct 15, 2013

Removed after 3.22 · Oct 30, 2025

1.0 In 25 of 49 releases 3.23

Description

This package provides an interface to simulate metabolic reconstruction from the BiGG database(http://bigg.ucsd.edu/) and other metabolic reconstruction databases. The package facilitates flux balance analysis (FBA) and the sampling of feasible flux distributions. Metabolic networks and estimated fluxes can be visualized with hypergraphs.

Call graph

Open call graph →

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Systems Biology
Pathway
Software › WorkflowStep › Visualization › Network
Software › StatisticalMethod › GraphAndNetwork
Software › WorkflowStep › Visualization
Software › ResearchField › Metabolomics

People

Unknown