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AgiMicroRna

Bioc current

Processing and Differential Expression Analysis of Agilent microRNA chips

v2.62.0 · software · GPL-3

Release Lineage

Entered 2.5 · Oct 28, 2009

Current · Requires R 4.6

1.0 In 34 of 49 releases 3.23

Description

Processing and Analysis of Agilent microRNA data

Code

Structure

Lines of code

4,587

Files

75

Compiled share

0%

Has compiled src

No

Language breakdown

R 2,215 (48.3%)Docs 1,351 (29.5%)Vignettes 1,021 (22.3%)

API

Exported functions

22

Internal functions

6

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

45.5%

\dontrun example ratio

42.9%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

33.3%

Unsafe pattern score

0

Dep constraint coverage

14.3%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.10

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

34

First release

2009-10-27

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

2

LOC over versions

v2.5: 3,207 LOCv2.6: 3,207 LOCv2.7: 3,188 LOCv2.8: 3,566 LOCv2.9: 3,566 LOCv2.10: 3,566 LOCv2.11: 3,566 LOCv2.12: 3,566 LOCv2.13: 3,566 LOCv2.14: 4,587 LOCv3.0: 4,587 LOCv3.1: 4,587 LOCv3.2: 4,587 LOCv3.3: 4,587 LOCv3.4: 4,587 LOCv3.5: 4,587 LOCv3.6: 4,587 LOCv3.7: 4,587 LOCv3.8: 4,587 LOCv3.9: 4,587 LOCv3.10: 4,587 LOCv3.11: 4,587 LOCv3.12: 4,587 LOCv3.13: 4,587 LOCv3.14: 4,587 LOCv3.15: 4,587 LOCv3.16: 4,587 LOCv3.17: 4,587 LOCv3.18: 4,587 LOCv3.19: 4,587 LOCv3.20: 4,587 LOCv3.21: 4,587 LOCv3.22: 4,587 LOCv3.23: 4,587 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

People

Pedro Lopez-Romero