Stephanie C. Hicks

10 Bioconductor packages On Bioconductor since May 2019 (7 years) · last active 2 months ago

Bioconductor Packages

10 packages

Package	Title	Category	Version
BatchSVG Bioc	Identify Batch-Biased Spatially Variable Genes	software	1.4.0
OSTA Bioc removed	Orchestrating Spatial Transcriptomics Analysis with Bioconductor		1.2.1
SpatialArtifacts Bioc	Identification and Classification of Spatial Artifacts in Visium and Visium HD Data	software	1.0.0
escheR Bioc	Unified multi-dimensional visualizations with Gestalt principles	software	1.12.0
methylCC Bioc	Estimate the cell composition of whole blood in DNA methylation samples	software	1.26.0
nnSVG Bioc	Scalable identification of spatially variable genes in spatially-resolved transcriptomics data	software	1.16.0
qsmooth Bioc	Smooth quantile normalization	software	1.28.0
spatialSimGP Bioc	Simulate Spatial Transcriptomics Data with the Mean-variance Relationship	software	1.6.0
spoon Bioc	Address the Mean-variance Relationship in Spatial Transcriptomics Data	software	1.8.0
tpSVG Bioc	Thin plate models to detect spatially variable genes	software	1.8.0