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ubms

Bayesian Models for Data from Unmarked Animals using 'Stan'

v1.2.8 · Sep 29, 2025 · GPL (>= 3)

Description

Fit Bayesian hierarchical models of animal abundance and occurrence via the 'rstan' package, the R interface to the 'Stan' C++ library. Supported models include single-season occupancy, dynamic occupancy, and N-mixture abundance models. Covariates on model parameters are specified using a formula-based interface similar to package 'unmarked', while also allowing for estimation of random slope and intercept terms. References: Carpenter et al. (2017) <doi:10.18637/jss.v076.i01>; Fiske and Chandler (2011) <doi:10.18637/jss.v043.i10>.

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GNU make is a SystemRequirements.
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installed package size

  installed size is 128.9Mb
  sub-directories of 1Mb or more:
    R       2.1Mb
    doc     1.1Mb
    libs  125.5Mb
NOTE r-oldrel-macos-x86_64

for GNU extensions in Makefiles

GNU make is a SystemRequirements.
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is 131.9Mb
  sub-directories of 1Mb or more:
    R       2.0Mb
    doc     1.1Mb
    libs  128.5Mb
NOTE r-oldrel-windows-x86_64

for GNU extensions in Makefiles

GNU make is a SystemRequirements.
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  6.7Mb
  sub-directories of 1Mb or more:
    R      1.1Mb
    doc    1.1Mb
    libs   4.3Mb
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NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

installed package size

  installed size is 128.9Mb
  sub-directories of 1Mb or more:
    R       2.1Mb
    doc     1.1Mb
    libs  125.5Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is 131.9Mb
  sub-directories of 1Mb or more:
    R       2.0Mb
    doc     1.1Mb
    libs  128.5Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  6.7Mb
  sub-directories of 1Mb or more:
    R      1.1Mb
    doc    1.1Mb
    libs   4.3Mb

Reverse Dependencies (1)

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Dependency Network

Dependencies Reverse dependencies unmarked ggplot2 gridExtra loo Matrix pbapply Rcpp reformulas rlang RSpectra rstan rstantools camtrapR ubms

Version History

new 1.2.8 Mar 9, 2026