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threeBrain

Your Advanced 3D Brain Visualization

v1.2.0 · Nov 7, 2024 · MPL-2.0

Description

A fast, interactive cross-platform, and easy to share 'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or 'AFNI/SUMA' surfaces. The viewer widget can be either standalone or embedded into 'R-shiny' applications. The standalone version only require a web browser with 'WebGL2' support (for example, 'Chrome', 'Firefox', 'Safari'), and can be inserted into any websites. The 'R-shiny' support allows the 3D viewer to be dynamically generated from reactive user inputs. Please check the publication by Wang, Magnotti, Zhang, and Beauchamp (2023, <doi:10.1523/ENEURO.0328-23.2023>) for electrode localization. This viewer has been fully adopted by 'RAVE' <https://openwetware.org/wiki/RAVE>, an interactive toolbox to analyze 'iEEG' data by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>). Please check 'citation("threeBrain")' for details.

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CRAN Check Status

3 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 NOTE
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (14 non-OK)
OK r-devel-linux-x86_64-debian-clang

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OK r-devel-linux-x86_64-debian-gcc

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OK r-devel-linux-x86_64-fedora-clang

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OK r-devel-linux-x86_64-fedora-gcc

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OK r-devel-macos-arm64

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OK r-devel-windows-x86_64

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NOTE r-oldrel-macos-arm64

installed package size

  installed size is  7.3Mb
  sub-directories of 1Mb or more:
    R              2.0Mb
    threeBrainJS   2.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  7.3Mb
  sub-directories of 1Mb or more:
    R              2.0Mb
    threeBrainJS   2.9Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  6.5Mb
  sub-directories of 1Mb or more:
    R              1.2Mb
    threeBrainJS   2.9Mb
OK r-patched-linux-x86_64

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OK r-release-linux-x86_64

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OK r-release-macos-arm64

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OK r-release-macos-x86_64

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OK r-release-windows-x86_64

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Check History

NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-oldrel-macos-arm64

installed package size

  installed size is  7.3Mb
  sub-directories of 1Mb or more:
    R              2.0Mb
    threeBrainJS   2.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

  installed size is  7.3Mb
  sub-directories of 1Mb or more:
    R              2.0Mb
    threeBrainJS   2.9Mb
NOTE r-oldrel-windows-x86_64

installed package size

  installed size is  6.5Mb
  sub-directories of 1Mb or more:
    R              1.2Mb
    threeBrainJS   2.9Mb

Reverse Dependencies (2)

imports

suggests

Dependency Network

Dependencies Reverse dependencies dipsaus xml2 servr png knitr shiny digest freesurferformats (>= 0.1.7) jsonlite stringr htmlwidgets (>= 1.3) R6 gifti oro.nifti ravecore ravepipeline threeBrain

Version History

new 1.2.0 Mar 9, 2026