simulMGF
Simulate SNP Matrix, Phenotype and Genotypic Effects
Description
Simulate genotypes in SNP (single nucleotide polymorphisms) Matrix as random numbers from an uniform distribution, for diploid organisms (coded by 0, 1, 2), Sikorska et al., (2013) <doi:10.1186/1471-2105-14-166>, or half-sib/full-sib SNP matrix from real or simulated parents SNP data, assuming mendelian segregation. Simulate phenotypic traits for real or simulated SNP data, controlled by a specific number of quantitative trait loci and their effects, sampled from a Normal or an Uniform distributions, assuming a pure additive model. This is useful for testing association and genomic prediction models or for educational purposes.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (14 non-OK)
CRAN incoming feasibility
Maintainer: ‘Martin Nahuel Garcia <garcia.martin@inta.gob.ar>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Martin", "Nahuel"),
family = "Garcia",
role = c("aut", "cre"),
email = "garcia.martin@inta.gob.ar")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Martin Nahuel Garcia <garcia.martin@inta.gob.ar>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Martin", "Nahuel"),
family = "Garcia",
role = c("aut", "cre"),
email = "garcia.martin@inta.gob.ar")
as necessary.
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Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
CRAN incoming feasibility
Maintainer: ‘Martin Nahuel Garcia <garcia.martin@inta.gob.ar>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Martin", "Nahuel"),
family = "Garcia",
role = c("aut", "cre"),
email = "garcia.martin@inta.gob.ar")
as necessary.
CRAN incoming feasibility
Maintainer: ‘Martin Nahuel Garcia <garcia.martin@inta.gob.ar>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: person(given = c("Martin", "Nahuel"),
family = "Garcia",
role = c("aut", "cre"),
email = "garcia.martin@inta.gob.ar")
as necessary.