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simode

Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching

v1.2.2 · Feb 16, 2024 · GPL (>= 2)

Description

Implements statistical inference for systems of ordinary differential equations, that uses the integral-matching criterion and takes advantage of the separability of parameters, in order to obtain initial parameter estimates for nonlinear least squares optimization. Dattner & Yaari (2018) <arXiv:1807.04202>. Dattner et al. (2017) <doi:10.1098/rsif.2016.0525>. Dattner & Klaassen (2015) <doi:10.1214/15-EJS1053>.

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CRAN incoming feasibility

Maintainer: ‘Rami Yaari <ramiyaari@gmail.com>’

The Description field contains
  & Yaari (2018) <arXiv:1807.04202>.  Dattner et al. (2017)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Rami Yaari <ramiyaari@gmail.com>’

The Description field contains
  & Yaari (2018) <arXiv:1807.04202>.  Dattner et al. (2017)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: ‘quadprog’
  All declared Imports should be used.
NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: ‘quadprog’
  All declared Imports should be used.
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NOTE 10 OK · 4 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 9, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Rami Yaari <ramiyaari@gmail.com>’

The Description field contains
  & Yaari (2018) <arXiv:1807.04202>.  Dattner et al. (2017)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Rami Yaari <ramiyaari@gmail.com>’

The Description field contains
  & Yaari (2018) <arXiv:1807.04202>.  Dattner et al. (2017)
Please refer to arXiv e-prints via their arXiv DOI <doi:10.48550/arXiv.YYMM.NNNNN>.
NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: ‘quadprog’
  All declared Imports should be used.
NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: ‘quadprog’
  All declared Imports should be used.

Dependency Network

Dependencies Reverse dependencies deSolve pracma quadprog glmnet ncvreg simode

Version History

new 1.2.2 Mar 9, 2026