rodeo

A Code Generator for ODE-Based Models

v0.9.2 · Sep 30, 2025 · GPL (>= 2)

Description

Provides an R6 class and several utility methods to facilitate the implementation of models based on ordinary differential equations. The heart of the package is a code generator that creates compiled 'Fortran' (or 'R') code which can be passed to a numerical solver. There is direct support for solvers contained in packages 'deSolve' and 'rootSolve'.

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CRAN Check Status

1 ERROR

13 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	110.2s
r-devel-linux-x86_64-debian-gcc	OK	72.5s
r-devel-linux-x86_64-fedora-clang	OK	183.7s
r-devel-linux-x86_64-fedora-gcc	OK	178.4s
r-devel-macos-arm64	OK	37s
r-devel-windows-x86_64	OK	214s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	152s
r-oldrel-windows-x86_64	OK	215s
r-patched-linux-x86_64	OK	95.4s
r-release-linux-x86_64	OK	95.1s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	137s
r-release-windows-x86_64	ERROR	97s

Check details (14 non-OK)

OK r-devel-linux-x86_64-debian-clang

OK r-devel-linux-x86_64-debian-gcc

OK r-devel-linux-x86_64-fedora-clang

OK r-devel-linux-x86_64-fedora-gcc

OK r-devel-macos-arm64

OK r-devel-windows-x86_64

OK r-oldrel-macos-arm64

OK r-oldrel-macos-x86_64

OK r-oldrel-windows-x86_64

OK r-patched-linux-x86_64

OK r-release-linux-x86_64

OK r-release-macos-arm64

OK r-release-macos-x86_64

ERROR r-release-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'rodeoVignette.Rmd' using rmarkdown
using Fortran compiler: 'GNU Fortran (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/RCompile/CRANpkg/local/4.5/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.f95 -o D:/RCompile/CRANpkg/local/4.5/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.o
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa0606335143a.f95 -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa0606335143a.o
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060668e3299.f95 -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060668e3299.o
gcc -shared -s -static-libgcc -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa0606bd474c1.dll tmp.def D:/RCompile/CRANpkg/local/4.5/rodeo.Rcheck/vign_test/rodeo/vignettes/vignetteData/fortran/functionsCode.o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa0606335143a.o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060668e3299.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -lgfortran -lquadmath -LD:/RCompile/recent/R-4.5.2p/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
using Fortran compiler: 'GNU Fortran (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/filea06075da5d7b.f95 -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/filea06075da5d7b.o
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/filea060597d76f9.f95 -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/filea060597d76f9.o
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060a822aa.f95 -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060a822aa.o
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa06025a6d7f.f95 -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa06025a6d7f.o
gcc -shared -s -static-libgcc -o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060456129f9.dll tmp.def D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/filea06075da5d7b.o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/filea060597d76f9.o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa060a822aa.o D:/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt/rodeoa06025a6d7f.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -lgfortran -lquadmath -LD:/RCompile/recent/R-4.5.2p/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'

Check History

ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 9, 2026

ERROR r-release-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'rodeoVignette.Rmd' using rmarkdown
using Fortran compiler: 'GNU Fortran (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Leaving directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
make[1]: Entering directory '/d/temp/2026_03_04_01_50_00_18124/RtmpAf8oZt'
gfortran      -pedantic -O2  -mfpmath=sse -msse2 -mstackrealign  -c  D:/RCompile/CRANpkg/local/4.5/rodeo.Rcheck/vign_test/rodeo/vignettes/

Dependency Network

Version History

new 0.9.2 Mar 9, 2026