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Simulate Agricultural Production and Evolution of Pesticide Resistance

v0.4.0.2 · May 1, 2025 · GPL (>= 2)

Description

Simulates individual-based models of agricultural pest management and the evolution of pesticide resistance. Management occurs on a spatially explicit landscape that is divided into an arbitrary number of farms that can grow one of up to 10 crops and apply one of up to 10 pesticides. Pest genomes are modelled in a way that allows for any number of pest traits with an arbitrary covariance structure that is constructed using an evolutionary algorithm in the mine_gmatrix() function. Simulations are then run using the run_farm_sim() function. This package thereby allows for highly mechanistic social-ecological models of the evolution of pesticide resistance under different types of crop rotation and pesticide application regimes.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Version History

new 0.4.0.2 Mar 10, 2026
updated 0.4.0.2 ← 0.3.4.0 diff Apr 30, 2025
updated 0.3.4.0 ← 0.3.0.1 diff Nov 29, 2023
updated 0.3.0.1 ← 0.2.0.9 diff Jul 12, 2022
updated 0.2.0.9 ← 0.2.0.8 diff Jan 5, 2022
updated 0.2.0.8 ← 0.2.0.2 diff Oct 5, 2021
new 0.2.0.2 Sep 21, 2021